Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01D020047.5 |
| Conread position: | 1-118 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-133 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-135 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 124, 101 |
| Conread position: | 1-143 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-149 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-150 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-150 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 96 |
| Conread position: | 1-150 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 38 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 66 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 154 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 52 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 1-165 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 129 |
| Conread position: | 1-169 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-169 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 117, 146 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 162 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 106, 155 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 156 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 48, 152 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 160 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 118, 161 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 70, 96 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 136 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 108, 122 |
| Conread position: | 1-172 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 2-148 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 117, 46 |
| Conread position: | 2-159 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 2-170 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-170 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-156 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 3-159 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 3-159 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 3-164 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 4-170 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 4-172 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 56 |
| Conread position: | 5-156 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 5-170 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 6-170 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 103, 150 |
| Conread position: | 9-170 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 149 |
| Conread position: | 10-142 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 10-169 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 100 |
| Conread position: | 11-151 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 117, 86 |
| Conread position: | 11-166 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 19-170 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 22-159 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 22-170 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 22-171 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 26-143 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 29-151 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.