Cow genome map

Conread name: Ss1.1-Tra1-TCH01D020047.5

Conread position: 1-134
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-147
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 1-149
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 1-149
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-149
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-149
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 121

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 117, 48

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 1-152
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 109, 80

Conread position: 1-152
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 1-153
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 123

Conread position: 1-153
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-153
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 66

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 1-153
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 101, 96

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 96

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-158
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 123, 45

Conread position: 1-159
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 82

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 136, 109

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 118, 18

Conread position: 1-160
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 1-161
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 129

Conread position: 1-164
Cow position:
Alignm length: 166
Alignm identity: 132
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 117, 109

Conread position: 1-166
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 113, 9

Conread position: 1-166
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 117, 94

Conread position: 1-166
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 1-166
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 53

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 0

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 112

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 51

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 1-170
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 140

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 149

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 110

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 156

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 103, 159

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 116, 156

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 107

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 141

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 45

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 115, 158

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 116, 0

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 157

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 96

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 108, 157

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 128

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-171
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-171
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 120

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 138

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-171
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 99, 94

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 141

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 138

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 1-172
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 59

Conread position: 1-178
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 69

Conread position: 1-179
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 1-179
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 68

Conread position: 1-190
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 113, 32

Conread position: 1-201
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 116

Conread position: 2-147
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 2-147
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 2-150
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 111, 127

Conread position: 2-150
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 113, 22

Conread position: 2-158
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 2-170
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 69

Conread position: 2-170
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 133

Conread position: 2-171
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 93

Conread position: 2-171
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 115, 80

Conread position: 3-135
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 3-152
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 110, 136

Conread position: 3-159
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 4-159
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 4-159
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 4-166
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 59

Conread position: 4-186
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 61

Conread position: 5-151
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 127

Conread position: 5-151
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 114, 104

Conread position: 6-140
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 8-186
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 50

Conread position: 8-208
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 9-170
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 22-159
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 22-171
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 22-172
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 33-166
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.