Cow genome map

Conread name: Ss1.1-Tra1-TCH01D020047.5

Conread position: 1-114
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-140
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 1-145
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 81

Conread position: 1-146
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 1-148
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 74

Conread position: 1-148
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 1-149
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 105, 48

Conread position: 1-149
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 1-150
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 84

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 32

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 1-151
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 1-152
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 39

Conread position: 1-152
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 1-153
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 1-153
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 131, 51

Conread position: 1-153
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 74

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 110

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 57

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 51

Conread position: 1-156
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-158
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 81

Conread position: 1-159
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 143

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 0

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 111, 71

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 148, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 1-159
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 52

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 66

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 112, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 130

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 1-159
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 114, 98

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-164
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 146

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 1-168
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 157

Conread position: 1-169
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 39

Conread position: 1-169
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 108, 18

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 117, 80

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 157

Conread position: 1-170
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 161

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 117, 155

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 157

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 155

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 1-170
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 74, 164

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 1-170
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 109, 163

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 154, 0

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 158

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 112, 120

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 154

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 1-170
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 5

Conread position: 1-170
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 112, 40

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 159

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 117

Conread position: 1-171
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 132

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-171
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 93

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 90

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-171
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 121, 88

Conread position: 1-171
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 80

Conread position: 1-172
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-178
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-179
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 1-190
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 2-151
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 2-154
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 151

Conread position: 2-159
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 2-167
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 2-169
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 155

Conread position: 2-170
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 110

Conread position: 2-170
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 114, 156

Conread position: 2-170
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 155

Conread position: 2-170
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 2-171
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 2-171
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 2-171
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 164

Conread position: 2-171
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 3-143
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 3-149
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-156
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 3-156
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 78

Conread position: 3-159
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 3-159
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 3-159
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 3-159
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 138, 0

Conread position: 3-170
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 114, 36

Conread position: 3-170
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 106, 115

Conread position: 3-170
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 152, 0

Conread position: 4-185
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 116

Conread position: 5-159
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 6-156
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 47

Conread position: 6-157
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 59

Conread position: 9-171
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 13

Conread position: 9-178
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 88

Conread position: 10-169
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 38

Conread position: 11-172
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 86

Conread position: 22-170
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 22-171
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 121

Conread position: 22-192
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 153

Conread position: 24-159
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 129

Conread position: 25-170
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 110, 67

Conread position: 35-192
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 121

Conread position: 42-170
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.