Cow genome map

Conread name: Ss1.1-Tra1-TCH01D020047.5

Conread position: 1-114
Cow position: chr9:8992235-8992122 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-118
Cow position: chr9:44584537-44584653 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 1-124
Cow position: chr9:47214601-47214480 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 1-126
Cow position: chr9:44915153-44915028 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 93

Conread position: 1-140
Cow position: chr9:7806017-7805879 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 1-140
Cow position: chr9:33838369-33838227 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 1-142
Cow position: chr9:59386825-59386683 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 117

Conread position: 1-143
Cow position: chr9:3343693-3343835 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-143
Cow position: chr9:34283897-34284038 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 110

Conread position: 1-144
Cow position: chr9:5110802-5110947 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 141

Conread position: 1-147
Cow position: chr9:58662188-58662329 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 1-148
Cow position: chr9:15215743-15215594 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 1-148
Cow position: chr9:38289378-38289233 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 51

Conread position: 1-148
Cow position: chr9:42062043-42062193 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 141

Conread position: 1-149
Cow position: chr9:4861328-4861480 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-149
Cow position: chr9:21384004-21383860 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 1-149
Cow position: chr9:26403729-26403877 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 128, 112

Conread position: 1-150
Cow position: chr9:5342303-5342158 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-150
Cow position: chr9:35832675-35832522 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 1-150
Cow position: chr9:54716658-54716513 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 46

Conread position: 1-150
Cow position: chr9:62668192-62668347 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 1-151
Cow position: chr9:9753447-9753299 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 1-151
Cow position: chr9:10650355-10650207 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-151
Cow position: chr9:34410452-34410301 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 133

Conread position: 1-151
Cow position: chr9:35028221-35028072 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 117

Conread position: 1-151
Cow position: chr9:43342275-43342424 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 105, 88

Conread position: 1-151
Cow position: chr9:52407108-52407261 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 1-152
Cow position: chr9:28354461-28354616 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 1-152
Cow position: chr9:40776742-40776893 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-153
Cow position: chr9:13761043-13761199 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-153
Cow position: chr9:18217155-18217003 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 126
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-153
Cow position: chr9:25400254-25400100 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 40

Conread position: 1-153
Cow position: chr9:26310450-26310605 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-153
Cow position: chr9:35167120-35167274 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 141, 0

Conread position: 1-153
Cow position: chr9:41781598-41781750 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 141

Conread position: 1-153
Cow position: chr9:64064419-64064260 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 1-155
Cow position: chr9:4646381-4646230 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 1-156
Cow position: chr9:1972892-1973041 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-156
Cow position: chr9:3220080-3220236 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 112

Conread position: 1-156
Cow position: chr9:6934129-6933974 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 40

Conread position: 1-156
Cow position: chr9:8534746-8534589 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 1-156
Cow position: chr9:9311802-9311960 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 1-156
Cow position: chr9:9815357-9815514 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 65

Conread position: 1-156
Cow position: chr9:16300625-16300461 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 1-156
Cow position: chr9:32307287-32307137 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 1-156
Cow position: chr9:50139229-50139386 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 111

Conread position: 1-157
Cow position: chr9:8337971-8338129 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-159
Cow position: chr9:3774109-3774263 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1-159
Cow position: chr9:4580460-4580307 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 1-159
Cow position: chr9:6089033-6089195 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 112, 26

Conread position: 1-159
Cow position: chr9:6852123-6851966 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 57

Conread position: 1-159
Cow position: chr9:8998293-8998459 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 1-159
Cow position: chr9:9552034-9552195 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 1-159
Cow position: chr9:26477160-26477319 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 0

Conread position: 1-159
Cow position: chr9:29185193-29185030 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-159
Cow position: chr9:32670003-32669845 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 118, 108

Conread position: 1-159
Cow position: chr9:38941488-38941329 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 1-159
Cow position: chr9:45756307-45756469 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 1-159
Cow position: chr9:49416931-49417089 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 109

Conread position: 1-159
Cow position: chr9:51557542-51557390 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-159
Cow position: chr9:51720953-51720800 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 65

Conread position: 1-159
Cow position: chr9:52598777-52598621 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-159
Cow position: chr9:52839936-52839784 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-159
Cow position: chr9:55889758-55889913 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 1-160
Cow position: chr9:5594447-5594605 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 1-161
Cow position: chr9:9443657-9443501 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 73

Conread position: 1-161
Cow position: chr9:15225352-15225194 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 1-161
Cow position: chr9:29684088-29684252 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 80

Conread position: 1-166
Cow position: chr9:54681453-54681616 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 1-169
Cow position: chr9:38624680-38624512 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 83

Conread position: 1-169
Cow position: chr9:41394703-41394536 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 1-169
Cow position: chr9:43443748-43443914 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 12, 53

Conread position: 1-169
Cow position: chr9:49709791-49709956 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1-169
Cow position: chr9:54528458-54528624 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 1-170
Cow position: chr9:1520796-1520626 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 157

Conread position: 1-170
Cow position: chr9:1751282-1751449 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 120

Conread position: 1-170
Cow position: chr9:1867395-1867561 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 1-170
Cow position: chr9:1878058-1877896 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 1-170
Cow position: chr9:1949861-1950031 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 122

Conread position: 1-170
Cow position: chr9:4630048-4630216 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 52

Conread position: 1-170
Cow position: chr9:5399079-5399249 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 157

Conread position: 1-170
Cow position: chr9:5433576-5433749 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 113, 160

Conread position: 1-170
Cow position: chr9:8288562-8288729 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 112, 32

Conread position: 1-170
Cow position: chr9:9461713-9461544 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 83

Conread position: 1-170
Cow position: chr9:11123539-11123371 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 115, 34

Conread position: 1-170
Cow position: chr9:11313566-11313400 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-170
Cow position: chr9:17411249-17411080 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 108

Conread position: 1-170
Cow position: chr9:17928701-17928871 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 157

Conread position: 1-170
Cow position: chr9:19493522-19493351 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 155

Conread position: 1-170
Cow position: chr9:19714024-19714186 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 118, 132

Conread position: 1-170
Cow position: chr9:23788383-23788549 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 1-170
Cow position: chr9:24872780-24872949 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 50

Conread position: 1-170
Cow position: chr9:27279253-27279420 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 112

Conread position: 1-170
Cow position: chr9:31814442-31814263 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 149

Conread position: 1-170
Cow position: chr9:32676621-32676791 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 112, 0

Conread position: 1-170
Cow position: chr9:33114290-33114458 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 60

Conread position: 1-170
Cow position: chr9:33597930-33598092 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 1-170
Cow position: chr9:33940549-33940716 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 117, 109

Conread position: 1-170
Cow position: chr9:36445564-36445740 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 163

Conread position: 1-170
Cow position: chr9:39681283-39681451 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 113, 153

Conread position: 1-170
Cow position: chr9:40005418-40005587 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 156

Conread position: 1-170
Cow position: chr9:40215191-40215353 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 1-170
Cow position: chr9:41282959-41283125 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 1-170
Cow position: chr9:43870919-43871090 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 158

Conread position: 1-170
Cow position: chr9:53326807-53326639 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 112, 78

Conread position: 1-170
Cow position: chr9:55084357-55084186 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 118, 29

Conread position: 1-171
Cow position: chr9:5209524-5209695 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 132

Conread position: 1-171
Cow position: chr9:17310618-17310448 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 114, 50

Conread position: 1-171
Cow position: chr9:22443683-22443513 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr9:24997573-24997405 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 1-171
Cow position: chr9:30477831-30477661 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 146, 101

Conread position: 1-171
Cow position: chr9:42446039-42445865 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 1-171
Cow position: chr9:51566551-51566380 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 139

Conread position: 1-171
Cow position: chr9:52513504-52513338 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 132

Conread position: 1-172
Cow position: chr9:12226033-12225863 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 113, 5

Conread position: 1-172
Cow position: chr9:43936889-43937055 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 1-172
Cow position: chr9:64559938-64559769 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 1-179
Cow position: chr9:5327202-5327378 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 0

Conread position: 1-185
Cow position: chr9:55321581-55321768 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 159

Conread position: 1-189
Cow position: chr9:42478538-42478346 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 1-193
Cow position: chr9:19903026-19903215 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 115, 0

Conread position: 2-148
Cow position: chr9:8723739-8723888 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 58

Conread position: 2-150
Cow position: chr9:5509669-5509817 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-159
Cow position: chr9:21888115-21888269 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 2-211
Cow position: chr9:38645399-38645194 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 30

Conread position: 3-119
Cow position: chr9:24652350-24652466 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-159
Cow position: chr9:9823560-9823403 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 104, 74

Conread position: 3-161
Cow position: chr9:64050615-64050456 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 136

Conread position: 3-171
Cow position: chr9:5836095-5836269 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 3-171
Cow position: chr9:11168676-11168844 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-171
Cow position: chr9:35105844-35105675 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 4-147
Cow position: chr9:44396609-44396749 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 4-149
Cow position: chr9:55287942-55287799 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 49

Conread position: 4-151
Cow position: chr9:35904798-35904651 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-159
Cow position: chr9:35547215-35547374 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 4-170
Cow position: chr9:45728726-45728890 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 151, 0

Conread position: 5-146
Cow position: chr9:56032367-56032229 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 5-161
Cow position: chr9:55532762-55532919 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 114, 105

Conread position: 6-150
Cow position: chr9:11304126-11303986 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 6-153
Cow position: chr9:47906333-47906180 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 6-153
Cow position: chr9:48100744-48100894 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 6-159
Cow position: chr9:50202521-50202672 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 114

Conread position: 6-171
Cow position: chr9:50543479-50543308 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 8-171
Cow position: chr9:22114684-22114520 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 102, 58

Conread position: 8-171
Cow position: chr9:35375377-35375542 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 29

Conread position: 9-146
Cow position: chr9:29819670-29819805 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 9-170
Cow position: chr9:60080854-60081017 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 39

Conread position: 9-172
Cow position: chr9:28726772-28726605 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 10-171
Cow position: chr9:22318302-22318465 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 100

Conread position: 12-170
Cow position: chr9:8306809-8306965 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 19-168
Cow position: chr9:41789246-41789394 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 94, 137

Conread position: 19-170
Cow position: chr9:49764623-49764768 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 24-153
Cow position: chr9:35849871-35850000 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 29-171
Cow position: chr9:6225482-6225339 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 12

Conread position: 33-170
Cow position: chr9:1952294-1952157 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 124

Conread position: 33-170
Cow position: chr9:3387665-3387802 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 123

Show alignments to all cow chromosomes.