Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01D090036.5.544 |
| Conread position: | 96-368 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 101-368 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 235 |
| Conread position: | 101-368 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-368 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 203 |
| Conread position: | 101-368 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 199 |
| Conread position: | 102-383 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 60, 66 |
| Conread position: | 359-643 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-643 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 359-643 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-643 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 360-643 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 360-643 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 463-643 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 641-811 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 641-918 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 641-919 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 641-919 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 641-919 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 641-919 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 641-919 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 642-919 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 701-908 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 919-1044 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 919-1044 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 919-1045 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 115, 66 |
| Conread position: | 919-1046 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 115, 55 |
| Conread position: | 919-1046 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 919-1046 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 919-1049 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 115, 68 |
| Conread position: | 1107-1262 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1113-1262 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1113-1376 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 1113-1432 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 38 |
| Conread position: | 1113-1536 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 1113-1536 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 35 |
Show alignments to all cow chromosomes.