Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01E040098.5 |
| Conread position: | 1-255 |
| Cow position: | chr11:17220642-17220895 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 150 |
| Conread position: | 1-266 |
| Cow position: | chr11:17280675-17280929 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-266 |
| Cow position: | chr11:30304811-30304566 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 143, 126 |
| Conread position: | 1-267 |
| Cow position: | chr11:21466642-21466381 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 150 |
| Conread position: | 1-268 |
| Cow position: | chr11:7072907-7073167 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 50, 142 |
| Conread position: | 1-287 |
| Cow position: | chr11:40777165-40777453 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 154 |
| Conread position: | 1-314 |
| Cow position: | chr11:63660016-63660333 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 52, 175 |
| Conread position: | 1-341 |
| Cow position: | chr11:30125681-30126005 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 1-369 |
| Cow position: | chr11:31925766-31925406 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 143 |
| Conread position: | 1-493 |
| Cow position: | chr11:49076111-49076573 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 1-520 |
| Cow position: | chr11:7687485-7686950 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 296 |
| Conread position: | 1-565 |
| Cow position: | chr11:8262134-8262691 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 1-585 |
| Cow position: | chr11:25527138-25526593 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 51 |
| Conread position: | 1-602 |
| Cow position: | chr11:8887584-8888173 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 1-631 |
| Cow position: | chr11:34020469-34019861 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 465, 69 |
| Conread position: | 1-631 |
| Cow position: | chr11:37492083-37492682 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 1-633 |
| Cow position: | chr11:44496030-44496646 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 1-634 |
| Cow position: | chr11:71329210-71328580 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 219 |
| Conread position: | 1-650 |
| Cow position: | chr11:9659833-9660452 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 69 |
| Conread position: | 1-694 |
| Cow position: | chr11:10210405-10211088 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 29 |
| Conread position: | 1-705 |
| Cow position: | chr11:77728960-77729666 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1-706 |
| Cow position: | chr11:54209184-54208479 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 1-742 |
| Cow position: | chr11:67847002-67847774 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 1-836 |
| Cow position: | chr11:4041501-4042361 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 47 |
| Conread position: | 1-840 |
| Cow position: | chr11:76374914-76375746 (view UCSC Genome Browser custom track) |
| Alignm length: | 859 |
| Alignm identity: | 624 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 30 |
| Conread position: | 1-888 |
| Cow position: | chr11:67450063-67449140 (view UCSC Genome Browser custom track) |
| Alignm length: | 935 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 160 |
| Conread position: | 1-889 |
| Cow position: | chr11:19064684-19065613 (view UCSC Genome Browser custom track) |
| Alignm length: | 934 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 249 |
| Conread position: | 1-889 |
| Cow position: | chr11:20921180-20922102 (view UCSC Genome Browser custom track) |
| Alignm length: | 929 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-889 |
| Cow position: | chr11:28230183-28231097 (view UCSC Genome Browser custom track) |
| Alignm length: | 929 |
| Alignm identity: | 616 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1-889 |
| Cow position: | chr11:36744615-36745534 (view UCSC Genome Browser custom track) |
| Alignm length: | 925 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 150 |
| Conread position: | 1-911 |
| Cow position: | chr11:17108120-17109045 (view UCSC Genome Browser custom track) |
| Alignm length: | 932 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 153 |
| Conread position: | 1-911 |
| Cow position: | chr11:32450433-32449492 (view UCSC Genome Browser custom track) |
| Alignm length: | 951 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-911 |
| Cow position: | chr11:37477553-37478492 (view UCSC Genome Browser custom track) |
| Alignm length: | 948 |
| Alignm identity: | 616 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 1-911 |
| Cow position: | chr11:57628481-57629419 (view UCSC Genome Browser custom track) |
| Alignm length: | 944 |
| Alignm identity: | 627 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 2-285 |
| Cow position: | chr11:44157671-44157953 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 149 |
| Conread position: | 2-303 |
| Cow position: | chr11:29234083-29234379 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 2-494 |
| Cow position: | chr11:11987685-11987198 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 155 |
| Conread position: | 2-501 |
| Cow position: | chr11:72110396-72110887 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 151 |
| Conread position: | 2-503 |
| Cow position: | chr11:10847009-10846523 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-503 |
| Cow position: | chr11:12093317-12092826 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 2-503 |
| Cow position: | chr11:38835852-38836347 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 152 |
| Conread position: | 2-519 |
| Cow position: | chr11:43515066-43515600 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 151 |
| Conread position: | 2-525 |
| Cow position: | chr11:12358857-12359373 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 152 |
| Conread position: | 2-525 |
| Cow position: | chr11:24392890-24392373 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 2-548 |
| Cow position: | chr11:41171128-41171652 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-566 |
| Cow position: | chr11:85394244-85394804 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-634 |
| Cow position: | chr11:26125366-26125997 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 149 |
| Conread position: | 2-634 |
| Cow position: | chr11:28055031-28055652 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 150 |
| Conread position: | 2-634 |
| Cow position: | chr11:29669064-29669694 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-637 |
| Cow position: | chr11:4027985-4028629 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 3-380 |
| Cow position: | chr11:13581412-13581785 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 7-687 |
| Cow position: | chr11:52462656-52461968 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 7-826 |
| Cow position: | chr11:1496511-1497359 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 7-887 |
| Cow position: | chr11:52418948-52418044 (view UCSC Genome Browser custom track) |
| Alignm length: | 910 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 144 |
| Conread position: | 7-889 |
| Cow position: | chr11:9736392-9737287 (view UCSC Genome Browser custom track) |
| Alignm length: | 922 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 11-200 |
| Cow position: | chr11:12351508-12351698 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 11-282 |
| Cow position: | chr11:31414681-31414951 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 11-287 |
| Cow position: | chr11:33195063-33195334 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 11-349 |
| Cow position: | chr11:10218004-10218338 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 11-489 |
| Cow position: | chr11:9157870-9158328 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 59 |
| Conread position: | 11-520 |
| Cow position: | chr11:42428895-42428395 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 134 |
| Conread position: | 11-536 |
| Cow position: | chr11:65161980-65162492 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 11-632 |
| Cow position: | chr11:19102931-19103554 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 11-633 |
| Cow position: | chr11:15998450-15997850 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 11-634 |
| Cow position: | chr11:23876860-23876235 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 11-634 |
| Cow position: | chr11:58133925-58133290 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 333 |
| Conread position: | 11-889 |
| Cow position: | chr11:53287899-53288792 (view UCSC Genome Browser custom track) |
| Alignm length: | 900 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 12-291 |
| Cow position: | chr11:49839103-49838828 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 12-303 |
| Cow position: | chr11:87127398-87127105 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 12-565 |
| Cow position: | chr11:28063245-28062679 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 145 |
| Conread position: | 12-634 |
| Cow position: | chr11:37093507-37094125 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 142 |
| Conread position: | 12-834 |
| Cow position: | chr11:3492567-3491713 (view UCSC Genome Browser custom track) |
| Alignm length: | 867 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 142 |
| Conread position: | 13-265 |
| Cow position: | chr11:44860971-44861227 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 134 |
| Conread position: | 13-291 |
| Cow position: | chr11:30183734-30184014 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 13-411 |
| Cow position: | chr11:33044567-33044952 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 288, 114 |
| Conread position: | 16-585 |
| Cow position: | chr11:9220466-9221028 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 22-521 |
| Cow position: | chr11:21441157-21440683 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 340 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 153, 20 |
| Conread position: | 24-614 |
| Cow position: | chr11:53432230-53432811 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 126 |
| Conread position: | 25-288 |
| Cow position: | chr11:32071656-32071389 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 118 |
| Conread position: | 39-282 |
| Cow position: | chr11:66726024-66725791 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 42-524 |
| Cow position: | chr11:24242963-24242501 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 26 |
| Conread position: | 54-696 |
| Cow position: | chr11:8244234-8243573 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 310 |
| Conread position: | 56-524 |
| Cow position: | chr11:17925061-17925508 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 246, 78 |
| Conread position: | 61-890 |
| Cow position: | chr11:45110635-45109785 (view UCSC Genome Browser custom track) |
| Alignm length: | 865 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 63-533 |
| Cow position: | chr11:44507669-44507220 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 49 |
| Conread position: | 65-1018 |
| Cow position: | chr11:24677555-24676613 (view UCSC Genome Browser custom track) |
| Alignm length: | 969 |
| Alignm identity: | 732 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 96-435 |
| Cow position: | chr11:7394582-7394259 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 46 |
| Conread position: | 105-527 |
| Cow position: | chr11:81853130-81853544 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 45 |
| Conread position: | 110-889 |
| Cow position: | chr11:52530482-52529688 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 127-826 |
| Cow position: | chr11:39798837-39799568 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 129-469 |
| Cow position: | chr11:9607236-9607581 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 174, 21 |
| Conread position: | 130-524 |
| Cow position: | chr11:38005881-38006270 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 200 |
| Conread position: | 142-536 |
| Cow position: | chr11:72005464-72005086 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 144-492 |
| Cow position: | chr11:25180500-25180174 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 315, 9 |
| Conread position: | 146-687 |
| Cow position: | chr11:7112876-7112330 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 17 |
| Conread position: | 147-911 |
| Cow position: | chr11:15983064-15982268 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 490 |
| Conread position: | 160-614 |
| Cow position: | chr11:4271423-4271881 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 179 |
| Conread position: | 218-630 |
| Cow position: | chr11:30304635-30304225 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 232-493 |
| Cow position: | chr11:75919902-75919637 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 234, 222 |
| Conread position: | 242-526 |
| Cow position: | chr11:56179241-56178966 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 263-486 |
| Cow position: | chr11:12351971-12352199 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 295-840 |
| Cow position: | chr11:40779366-40779918 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 311-626 |
| Cow position: | chr11:30126025-30126352 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 189 |
| Conread position: | 311-630 |
| Cow position: | chr11:21466372-21466048 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 155, 5 |
| Conread position: | 312-633 |
| Cow position: | chr11:75132794-75132473 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 142 |
| Conread position: | 317-633 |
| Cow position: | chr11:66725577-66725256 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 176, 5 |
| Conread position: | 331-889 |
| Cow position: | chr11:63661331-63661890 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 132 |
| Conread position: | 351-612 |
| Cow position: | chr11:39788693-39788964 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 183 |
| Conread position: | 351-871 |
| Cow position: | chr11:7122111-7122643 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 86 |
| Conread position: | 353-669 |
| Cow position: | chr11:55497653-55497325 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 358-634 |
| Cow position: | chr11:44158240-44158528 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 90, 239 |
| Conread position: | 358-911 |
| Cow position: | chr11:33195704-33196266 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 104 |
| Conread position: | 363-747 |
| Cow position: | chr11:31925361-31924968 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 536-840 |
| Cow position: | chr11:7686344-7686035 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 282 |
| Conread position: | 536-1146 |
| Cow position: | chr11:7393801-7393196 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 121 |
| Conread position: | 623-1146 |
| Cow position: | chr11:7112420-7111896 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 43 |
| Conread position: | 717-1141 |
| Cow position: | chr11:15996638-15996220 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 5 |
| Conread position: | 727-1146 |
| Cow position: | chr11:52461958-52461544 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 179 |
| Conread position: | 787-1146 |
| Cow position: | chr11:77778372-77778730 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 115 |
| Conread position: | 843-1142 |
| Cow position: | chr11:8282546-8282236 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 102, 63 |
| Conread position: | 904-1140 |
| Cow position: | chr11:13057453-13057695 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 108, 42 |
| Conread position: | 927-1141 |
| Cow position: | chr11:9660657-9660878 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 932-1149 |
| Cow position: | chr11:34019642-34019419 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 81, 44 |
Show alignments to all cow chromosomes.