Cow genome map

Conread name: Ss1.1-Tra1-TCH01E040098.5

Conread position: 1-237
Cow position: chr15:4733371-4733136 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 110

Conread position: 1-270
Cow position: chr15:41365689-41365420 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 42

Conread position: 1-271
Cow position: chr15:6472401-6472658 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 146

Conread position: 1-271
Cow position: chr15:36970433-36970161 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 49, 153

Conread position: 1-295
Cow position: chr15:4195972-4195683 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 146

Conread position: 1-313
Cow position: chr15:444118-443810 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 153

Conread position: 1-314
Cow position: chr15:7233821-7233514 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 52, 153

Conread position: 1-359
Cow position: chr15:17271868-17272228 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 52

Conread position: 1-360
Cow position: chr15:1772008-1771650 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 143

Conread position: 1-366
Cow position: chr15:6594315-6594680 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 153

Conread position: 1-370
Cow position: chr15:690300-689957 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 1-393
Cow position: chr15:49676535-49676162 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 157

Conread position: 1-454
Cow position: chr15:44828324-44827872 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 153

Conread position: 1-455
Cow position: chr15:10888119-10887658 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-457
Cow position: chr15:4764723-4764278 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 153

Conread position: 1-469
Cow position: chr15:685681-685214 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 173

Conread position: 1-491
Cow position: chr15:7928134-7927657 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 322
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 9

Conread position: 1-502
Cow position: chr15:32722675-32723164 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 64

Conread position: 1-503
Cow position: chr15:37392008-37391520 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 33

Conread position: 1-520
Cow position: chr15:4384784-4384268 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 154

Conread position: 1-532
Cow position: chr15:324456-323903 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 83

Conread position: 1-560
Cow position: chr15:12614576-12614035 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 362
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 98

Conread position: 1-565
Cow position: chr15:35734966-35734416 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 142

Conread position: 1-585
Cow position: chr15:36642136-36641559 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 135

Conread position: 1-597
Cow position: chr15:7260137-7259508 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 153

Conread position: 1-630
Cow position: chr15:6078243-6077638 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 99

Conread position: 1-630
Cow position: chr15:6371331-6371947 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 1-631
Cow position: chr15:21961022-21960417 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 153

Conread position: 1-631
Cow position: chr15:35747811-35747212 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 159

Conread position: 1-633
Cow position: chr15:6277742-6278359 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 1-633
Cow position: chr15:7894693-7895293 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 152

Conread position: 1-687
Cow position: chr15:10787585-10788241 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 149

Conread position: 1-744
Cow position: chr15:32710054-32709283 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 144

Conread position: 1-834
Cow position: chr15:21877848-21878713 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 150

Conread position: 1-880
Cow position: chr15:8098997-8098125 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 127

Conread position: 1-882
Cow position: chr15:32693063-32692170 (view UCSC Genome Browser custom track)
Alignm length: 908
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 9

Conread position: 1-889
Cow position: chr15:1519640-1520542 (view UCSC Genome Browser custom track)
Alignm length: 911
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 1-889
Cow position: chr15:2593300-2594204 (view UCSC Genome Browser custom track)
Alignm length: 921
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 150

Conread position: 1-889
Cow position: chr15:2648147-2649061 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 146

Conread position: 1-889
Cow position: chr15:13428548-13427636 (view UCSC Genome Browser custom track)
Alignm length: 923
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 57

Conread position: 1-889
Cow position: chr15:22204604-22205527 (view UCSC Genome Browser custom track)
Alignm length: 930
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-890
Cow position: chr15:55710-54805 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 141

Conread position: 1-911
Cow position: chr15:11598605-11599544 (view UCSC Genome Browser custom track)
Alignm length: 955
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 92

Conread position: 1-911
Cow position: chr15:18268478-18269405 (view UCSC Genome Browser custom track)
Alignm length: 946
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-911
Cow position: chr15:20748925-20747979 (view UCSC Genome Browser custom track)
Alignm length: 953
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 698

Conread position: 1-1147
Cow position: chr15:32680038-32681191 (view UCSC Genome Browser custom track)
Alignm length: 1182
Alignm identity: 815
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 99

Conread position: 2-252
Cow position: chr15:4921652-4921404 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 142

Conread position: 2-282
Cow position: chr15:3843315-3843588 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 141

Conread position: 2-307
Cow position: chr15:3261899-3262202 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 133

Conread position: 2-314
Cow position: chr15:42320908-42321221 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 48, 142

Conread position: 2-329
Cow position: chr15:19738545-19738868 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 143

Conread position: 2-349
Cow position: chr15:1662887-1662559 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 0

Conread position: 2-416
Cow position: chr15:2011592-2011190 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 100

Conread position: 2-446
Cow position: chr15:24294599-24294176 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 2-455
Cow position: chr15:15347612-15348055 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 152

Conread position: 2-504
Cow position: chr15:44069301-44068812 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 152

Conread position: 2-515
Cow position: chr15:490651-491168 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 65

Conread position: 2-533
Cow position: chr15:7836752-7836228 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 146

Conread position: 2-534
Cow position: chr15:40104977-40104447 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 284

Conread position: 2-540
Cow position: chr15:21448569-21448047 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 71

Conread position: 2-613
Cow position: chr15:18333319-18333937 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 2-616
Cow position: chr15:12421658-12422272 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 140

Conread position: 2-632
Cow position: chr15:6554346-6554979 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 2-634
Cow position: chr15:525342-525972 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 123

Conread position: 2-634
Cow position: chr15:2076161-2075536 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 86

Conread position: 2-634
Cow position: chr15:17039744-17040373 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 69

Conread position: 2-634
Cow position: chr15:32494877-32495510 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 2-634
Cow position: chr15:42490713-42490082 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 152

Conread position: 2-635
Cow position: chr15:51216102-51215464 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 2-657
Cow position: chr15:4649345-4648701 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 3-307
Cow position: chr15:11624426-11624120 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 20, 173

Conread position: 3-502
Cow position: chr15:1763601-1763096 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 292

Conread position: 3-516
Cow position: chr15:17219363-17219845 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 331
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 75

Conread position: 3-631
Cow position: chr15:36648419-36647820 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 3-834
Cow position: chr15:1781761-1780913 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 6-1141
Cow position: chr15:35648711-35649814 (view UCSC Genome Browser custom track)
Alignm length: 1154
Alignm identity: 825
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 162

Conread position: 7-330
Cow position: chr15:17787654-17787965 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 42, 83

Conread position: 7-401
Cow position: chr15:51800242-51799860 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 7-492
Cow position: chr15:45886305-45885846 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 7-707
Cow position: chr15:50124435-50125157 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 27

Conread position: 7-749
Cow position: chr15:7186534-7187309 (view UCSC Genome Browser custom track)
Alignm length: 780
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 124

Conread position: 7-837
Cow position: chr15:370152-371003 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 308

Conread position: 7-883
Cow position: chr15:50145006-50144091 (view UCSC Genome Browser custom track)
Alignm length: 921
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 27

Conread position: 10-794
Cow position: chr15:24793554-24792778 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 11-145
Cow position: chr15:4170194-4170330 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 11-214
Cow position: chr15:8749932-8749726 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 142

Conread position: 11-258
Cow position: chr15:4670918-4670674 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 102

Conread position: 11-266
Cow position: chr15:8000745-8001005 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 11-270
Cow position: chr15:4795179-4794920 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 94

Conread position: 11-307
Cow position: chr15:24715592-24715299 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 85

Conread position: 11-518
Cow position: chr15:4630409-4630929 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 120

Conread position: 11-518
Cow position: chr15:38979418-38978901 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 144

Conread position: 11-526
Cow position: chr15:10479202-10479702 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 101

Conread position: 11-527
Cow position: chr15:2007039-2006537 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 339
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 134

Conread position: 11-527
Cow position: chr15:8408062-8407544 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 348
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 122

Conread position: 11-603
Cow position: chr15:4961150-4960580 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 11-614
Cow position: chr15:18576223-18575619 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 280

Conread position: 11-614
Cow position: chr15:42936213-42935610 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 143

Conread position: 11-851
Cow position: chr15:7933474-7932646 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 140

Conread position: 11-891
Cow position: chr15:327907-327030 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 135

Conread position: 11-891
Cow position: chr15:7544379-7543469 (view UCSC Genome Browser custom track)
Alignm length: 918
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 141

Conread position: 11-911
Cow position: chr15:17080689-17081615 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 135

Conread position: 11-911
Cow position: chr15:22920624-22919703 (view UCSC Genome Browser custom track)
Alignm length: 937
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 142

Conread position: 12-525
Cow position: chr15:31358401-31357891 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 107

Conread position: 12-536
Cow position: chr15:35754329-35754834 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 64

Conread position: 13-265
Cow position: chr15:23157330-23157586 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 216

Conread position: 13-493
Cow position: chr15:20080008-20080476 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 300
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 140

Conread position: 13-535
Cow position: chr15:21816250-21816761 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 141

Conread position: 14-634
Cow position: chr15:6156472-6157065 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 42

Conread position: 15-370
Cow position: chr15:17291951-17291579 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 132

Conread position: 16-637
Cow position: chr15:316835-317455 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 140

Conread position: 16-808
Cow position: chr15:2924011-2923229 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 139

Conread position: 17-630
Cow position: chr15:4677988-4677396 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 19-589
Cow position: chr15:6386802-6387378 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 22-270
Cow position: chr15:6650570-6650808 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 24-473
Cow position: chr15:4681703-4681257 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 41

Conread position: 25-466
Cow position: chr15:38957536-38957976 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 233

Conread position: 26-889
Cow position: chr15:28490662-28491549 (view UCSC Genome Browser custom track)
Alignm length: 905
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 125

Conread position: 27-291
Cow position: chr15:1236889-1236621 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 16

Conread position: 28-338
Cow position: chr15:10576840-10576526 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 179
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 55

Conread position: 55-592
Cow position: chr15:2902698-2903207 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 359
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 393, 86

Conread position: 57-289
Cow position: chr15:16540763-16540538 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 58-330
Cow position: chr15:2676851-2677123 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 238, 81

Conread position: 62-250
Cow position: chr15:3038076-3038267 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 0

Conread position: 68-265
Cow position: chr15:25789752-25789947 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 75-515
Cow position: chr15:14583170-14583611 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 75

Conread position: 77-648
Cow position: chr15:6456719-6456153 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 73

Conread position: 80-521
Cow position: chr15:25135041-25135447 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 299
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 386, 62

Conread position: 101-742
Cow position: chr15:4143355-4144021 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 49

Conread position: 114-540
Cow position: chr15:21666627-21667041 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 36

Conread position: 120-868
Cow position: chr15:8673161-8673936 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 30

Conread position: 150-468
Cow position: chr15:11299351-11299648 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 282, 52

Conread position: 150-535
Cow position: chr15:7541335-7540961 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 233, 156

Conread position: 151-669
Cow position: chr15:2641056-2640505 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 359
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 21

Conread position: 158-518
Cow position: chr15:52635516-52635158 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 52

Conread position: 169-542
Cow position: chr15:36627264-36627632 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 147

Conread position: 187-836
Cow position: chr15:53338384-53337757 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 144

Conread position: 193-493
Cow position: chr15:15266474-15266770 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 75, 59

Conread position: 227-889
Cow position: chr15:1771741-1771061 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 386
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 64, 489

Conread position: 234-634
Cow position: chr15:4921136-4920739 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 214, 7

Conread position: 253-634
Cow position: chr15:12272532-12272911 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 195, 78

Conread position: 253-637
Cow position: chr15:8749490-8749102 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 204, 21

Conread position: 259-879
Cow position: chr15:17291669-17291047 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 171

Conread position: 263-633
Cow position: chr15:4794948-4794575 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 30

Conread position: 266-565
Cow position: chr15:21623391-21623086 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 189

Conread position: 273-632
Cow position: chr15:6184369-6184007 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 181

Conread position: 277-627
Cow position: chr15:25790226-25790580 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 189, 16

Conread position: 277-631
Cow position: chr15:23157855-23158192 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 193, 16

Conread position: 280-891
Cow position: chr15:6473987-6474602 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 388
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 74

Conread position: 293-566
Cow position: chr15:4732840-4732578 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 174, 56

Conread position: 296-633
Cow position: chr15:3038267-3038600 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 170, 48

Conread position: 298-622
Cow position: chr15:38195317-38194998 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 172, 46

Conread position: 351-834
Cow position: chr15:36969823-36969327 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 307
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 116, 459

Conread position: 351-891
Cow position: chr15:7233076-7232527 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 205

Conread position: 353-719
Cow position: chr15:17345134-17345508 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 114, 28

Conread position: 363-634
Cow position: chr15:3262504-3262785 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 232

Conread position: 367-891
Cow position: chr15:4807557-4807022 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 268

Conread position: 369-581
Cow position: chr15:13520848-13520633 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 75

Conread position: 374-633
Cow position: chr15:28451028-28450777 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 17

Conread position: 381-911
Cow position: chr15:715048-714505 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 331
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 419

Conread position: 382-626
Cow position: chr15:4667517-4667268 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 396-889
Cow position: chr15:52759283-52759772 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 306
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 166, 40

Conread position: 471-910
Cow position: chr15:689575-689135 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 278
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 44

Conread position: 542-1022
Cow position: chr15:16591122-16591627 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 189

Conread position: 545-841
Cow position: chr15:21817349-21817648 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 10, 185

Conread position: 582-849
Cow position: chr15:38958210-38958468 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 80

Conread position: 616-889
Cow position: chr15:6595223-6595498 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 183

Conread position: 628-1146
Cow position: chr15:36641578-36641072 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 36

Conread position: 705-1094
Cow position: chr15:4667235-4666855 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 255
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 191, 126

Conread position: 753-1146
Cow position: chr15:53298247-53297845 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 145

Conread position: 846-1149
Cow position: chr15:41363424-41363118 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 200
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 158, 58

Conread position: 889-1134
Cow position: chr15:23158609-23158859 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 15

Conread position: 915-1113
Cow position: chr15:4794356-4794149 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 925-1149
Cow position: chr15:6651568-6651799 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 207

Conread position: 927-1134
Cow position: chr15:6183835-6183619 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 927-1149
Cow position: chr15:7895529-7895758 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 980-1146
Cow position: chr15:16926858-16926686 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 988-1146
Cow position: chr15:24792645-24792482 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.