Cow genome map

Conread name: Ss1.1-Tra1-TCH01E040098.5

Conread position: 1-131
Cow position: chr2:34565533-34565666 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 130

Conread position: 1-147
Cow position: chr2:10712036-10712187 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 1-240
Cow position: chr2:6772769-6773009 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 118

Conread position: 1-253
Cow position: chr2:49471640-49471387 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 49, 153

Conread position: 1-260
Cow position: chr2:46946062-46945796 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 193, 0

Conread position: 1-264
Cow position: chr2:11969368-11969623 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 96

Conread position: 1-266
Cow position: chr2:52152457-52152725 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 154

Conread position: 1-269
Cow position: chr2:41172082-41171820 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 22

Conread position: 1-276
Cow position: chr2:50321690-50321415 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 142

Conread position: 1-285
Cow position: chr2:5905454-5905740 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 9

Conread position: 1-285
Cow position: chr2:28621434-28621730 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 146, 126

Conread position: 1-291
Cow position: chr2:82167002-82166719 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 1-347
Cow position: chr2:5519594-5519944 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 148

Conread position: 1-500
Cow position: chr2:32458614-32459115 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 316

Conread position: 1-501
Cow position: chr2:78761869-78761389 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 106

Conread position: 1-515
Cow position: chr2:202257-202774 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 150

Conread position: 1-526
Cow position: chr2:54649404-54649919 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 1-535
Cow position: chr2:42333873-42334392 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 145

Conread position: 1-539
Cow position: chr2:20903744-20904250 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 38

Conread position: 1-540
Cow position: chr2:3730129-3729610 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 154

Conread position: 1-577
Cow position: chr2:75251150-75250619 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 51

Conread position: 1-603
Cow position: chr2:32654741-32654131 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 87

Conread position: 1-614
Cow position: chr2:24921739-24921128 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 90

Conread position: 1-621
Cow position: chr2:47604408-47605026 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 64

Conread position: 1-629
Cow position: chr2:2102074-2102664 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 55

Conread position: 1-631
Cow position: chr2:1491034-1491630 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 51

Conread position: 1-631
Cow position: chr2:5481248-5481853 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 51

Conread position: 1-631
Cow position: chr2:72922438-72923053 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 71

Conread position: 1-652
Cow position: chr2:44346109-44345496 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 146

Conread position: 1-671
Cow position: chr2:9907306-9906622 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 1-682
Cow position: chr2:1673260-1673927 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 63

Conread position: 1-694
Cow position: chr2:57142293-57143020 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 99

Conread position: 1-707
Cow position: chr2:6960138-6959432 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 9

Conread position: 1-731
Cow position: chr2:3325171-3325938 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 92

Conread position: 1-731
Cow position: chr2:51305514-51306197 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 142

Conread position: 1-749
Cow position: chr2:26921090-26920309 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-751
Cow position: chr2:2380519-2379740 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 71

Conread position: 1-769
Cow position: chr2:14560593-14559789 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 1-783
Cow position: chr2:44935691-44936472 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 51

Conread position: 1-824
Cow position: chr2:26865149-26866003 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-840
Cow position: chr2:176135-176961 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 1-860
Cow position: chr2:44991886-44992733 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 153

Conread position: 1-885
Cow position: chr2:47039019-47039929 (view UCSC Genome Browser custom track)
Alignm length: 920
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 55

Conread position: 1-889
Cow position: chr2:41685907-41684975 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 153

Conread position: 1-889
Cow position: chr2:54737017-54736102 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 153

Conread position: 1-894
Cow position: chr2:44090693-44089772 (view UCSC Genome Browser custom track)
Alignm length: 933
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-911
Cow position: chr2:27817170-27816220 (view UCSC Genome Browser custom track)
Alignm length: 955
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-911
Cow position: chr2:41656478-41655545 (view UCSC Genome Browser custom track)
Alignm length: 948
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 58

Conread position: 1-911
Cow position: chr2:51991137-51992073 (view UCSC Genome Browser custom track)
Alignm length: 950
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 102

Conread position: 1-911
Cow position: chr2:52615865-52614916 (view UCSC Genome Browser custom track)
Alignm length: 955
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 1-911
Cow position: chr2:57334594-57333655 (view UCSC Genome Browser custom track)
Alignm length: 946
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 55

Conread position: 1-1053
Cow position: chr2:41149437-41148430 (view UCSC Genome Browser custom track)
Alignm length: 1083
Alignm identity: 753
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 48

Conread position: 1-1099
Cow position: chr2:6877889-6876812 (view UCSC Genome Browser custom track)
Alignm length: 1121
Alignm identity: 779
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 2-250
Cow position: chr2:422460-422210 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 50, 140

Conread position: 2-307
Cow position: chr2:283300-283607 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 150

Conread position: 2-324
Cow position: chr2:25888814-25889137 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 149

Conread position: 2-367
Cow position: chr2:11159734-11160100 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 152

Conread position: 2-440
Cow position: chr2:24145668-24145244 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 44

Conread position: 2-475
Cow position: chr2:45213863-45214330 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 2-503
Cow position: chr2:50983835-50984320 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 152

Conread position: 2-518
Cow position: chr2:8117645-8117123 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 343

Conread position: 2-518
Cow position: chr2:12224754-12225258 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 154

Conread position: 2-535
Cow position: chr2:32388959-32388422 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 130

Conread position: 2-548
Cow position: chr2:28650833-28651376 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 151

Conread position: 2-565
Cow position: chr2:10269268-10269848 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 79

Conread position: 2-595
Cow position: chr2:47810404-47809823 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 2-623
Cow position: chr2:49604123-49603497 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 114

Conread position: 2-633
Cow position: chr2:19009626-19008997 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 137

Conread position: 2-634
Cow position: chr2:975881-976504 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 141

Conread position: 2-634
Cow position: chr2:13046297-13046918 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 48

Conread position: 2-634
Cow position: chr2:52062059-52061451 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 149

Conread position: 2-634
Cow position: chr2:53329141-53328512 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 149

Conread position: 3-307
Cow position: chr2:20921389-20921685 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 174

Conread position: 3-454
Cow position: chr2:35352769-35352324 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 298
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 68

Conread position: 6-290
Cow position: chr2:1647545-1647273 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 190, 15

Conread position: 7-320
Cow position: chr2:769002-769313 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 72, 54

Conread position: 7-338
Cow position: chr2:43959007-43958692 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 242, 55

Conread position: 7-373
Cow position: chr2:36991276-36990919 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 108

Conread position: 7-889
Cow position: chr2:67421456-67422359 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 166

Conread position: 7-890
Cow position: chr2:2413408-2414320 (view UCSC Genome Browser custom track)
Alignm length: 924
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 148

Conread position: 10-445
Cow position: chr2:2357072-2357502 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 37

Conread position: 10-493
Cow position: chr2:75676493-75676949 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 325
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 456, 39

Conread position: 10-634
Cow position: chr2:65939062-65939679 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 11-151
Cow position: chr2:37790771-37790908 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 136, 43

Conread position: 11-252
Cow position: chr2:50076988-50076745 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 136

Conread position: 11-267
Cow position: chr2:52655853-52655600 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 11-270
Cow position: chr2:85356385-85356644 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 141

Conread position: 11-291
Cow position: chr2:2079961-2079685 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 46

Conread position: 11-291
Cow position: chr2:16076916-16077188 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 139, 0

Conread position: 11-468
Cow position: chr2:38589560-38589124 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 11-489
Cow position: chr2:56438336-56438804 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 11-524
Cow position: chr2:36031681-36032187 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 56

Conread position: 11-634
Cow position: chr2:42672002-42672648 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 11-671
Cow position: chr2:39420976-39420282 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 140

Conread position: 11-716
Cow position: chr2:22077172-22076467 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 143

Conread position: 11-735
Cow position: chr2:16288636-16287914 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 104

Conread position: 11-889
Cow position: chr2:2184873-2185752 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 136

Conread position: 11-911
Cow position: chr2:25031092-25032012 (view UCSC Genome Browser custom track)
Alignm length: 934
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 143

Conread position: 12-465
Cow position: chr2:74392008-74392429 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 304
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 81

Conread position: 12-535
Cow position: chr2:63293189-63293699 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 135

Conread position: 12-561
Cow position: chr2:78741517-78740986 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 126

Conread position: 12-593
Cow position: chr2:16899629-16899047 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 144

Conread position: 13-307
Cow position: chr2:5870953-5871240 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 54

Conread position: 13-489
Cow position: chr2:10733454-10733915 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 13-493
Cow position: chr2:52680806-52680338 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 303
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 29

Conread position: 13-527
Cow position: chr2:782354-782857 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 121

Conread position: 22-585
Cow position: chr2:2363526-2362981 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 124

Conread position: 30-594
Cow position: chr2:10186863-10187423 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 32

Conread position: 33-292
Cow position: chr2:15578294-15578551 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 116

Conread position: 33-631
Cow position: chr2:10843974-10844558 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 55-304
Cow position: chr2:28644047-28644297 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 166, 79

Conread position: 55-580
Cow position: chr2:81256143-81255621 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 96

Conread position: 56-336
Cow position: chr2:4235511-4235247 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 255, 71

Conread position: 56-524
Cow position: chr2:3749243-3748790 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 317
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 114, 14

Conread position: 57-263
Cow position: chr2:73191173-73190970 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 91

Conread position: 58-266
Cow position: chr2:43364033-43363832 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 60-751
Cow position: chr2:212898-213621 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 104

Conread position: 60-911
Cow position: chr2:80956312-80957177 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 83

Conread position: 62-634
Cow position: chr2:36979432-36978857 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 91

Conread position: 63-266
Cow position: chr2:80516397-80516200 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 47

Conread position: 77-633
Cow position: chr2:28792369-28791817 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 76

Conread position: 89-286
Cow position: chr2:44166043-44166237 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 101-630
Cow position: chr2:53473845-53474351 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 359
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 365, 76

Conread position: 114-849
Cow position: chr2:7901344-7900599 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 26

Conread position: 116-631
Cow position: chr2:40245124-40244637 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 37

Conread position: 122-633
Cow position: chr2:6879448-6878938 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 28

Conread position: 140-465
Cow position: chr2:34567429-34567754 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 274

Conread position: 143-857
Cow position: chr2:5485697-5486383 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 90

Conread position: 147-889
Cow position: chr2:59414418-59415193 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 24

Conread position: 152-527
Cow position: chr2:85068996-85069367 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 78

Conread position: 157-515
Cow position: chr2:7210666-7210318 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 309, 175

Conread position: 217-616
Cow position: chr2:50074440-50074045 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 107

Conread position: 218-911
Cow position: chr2:40962947-40963674 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 602

Conread position: 235-515
Cow position: chr2:25244533-25244257 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 221, 105

Conread position: 237-911
Cow position: chr2:4621657-4622341 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 410
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 199, 243

Conread position: 242-634
Cow position: chr2:53983988-53984371 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 206, 88

Conread position: 250-565
Cow position: chr2:28621902-28622238 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 253-627
Cow position: chr2:44166179-44166540 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 203, 5

Conread position: 256-749
Cow position: chr2:49470964-49470460 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 312
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 80, 96

Conread position: 275-1149
Cow position: chr2:15578824-15579725 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 18

Conread position: 277-521
Cow position: chr2:11969895-11970139 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 190, 16

Conread position: 294-631
Cow position: chr2:46945650-46945321 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 172, 55

Conread position: 296-631
Cow position: chr2:80516198-80515871 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 41

Conread position: 304-633
Cow position: chr2:82165254-82164923 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 150

Conread position: 316-633
Cow position: chr2:6773155-6773460 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 248, 138

Conread position: 327-627
Cow position: chr2:16078287-16078591 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 139, 172

Conread position: 351-657
Cow position: chr2:10493544-10493226 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 0

Conread position: 351-672
Cow position: chr2:36238047-36237714 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 0

Conread position: 358-890
Cow position: chr2:5905769-5906289 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 348
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 146, 55

Conread position: 369-631
Cow position: chr2:422058-421789 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 85

Conread position: 422-631
Cow position: chr2:17729410-17729623 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 94

Conread position: 463-1004
Cow position: chr2:2357660-2358196 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 351
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 66, 73

Conread position: 467-643
Cow position: chr2:36054279-36054462 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 117

Conread position: 534-702
Cow position: chr2:24394049-24394227 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 542-1099
Cow position: chr2:783023-783569 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 19

Conread position: 544-888
Cow position: chr2:52629079-52629424 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 113

Conread position: 551-766
Cow position: chr2:32435442-32435652 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 82

Conread position: 558-1013
Cow position: chr2:25244067-25243601 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 225

Conread position: 726-841
Cow position: chr2:16284671-16284552 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 772-1139
Cow position: chr2:28644528-28644898 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 21

Conread position: 803-1140
Cow position: chr2:24394500-24394848 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 85

Conread position: 808-1146
Cow position: chr2:14559786-14559459 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 96

Conread position: 846-1135
Cow position: chr2:6878791-6878499 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 39

Conread position: 882-1146
Cow position: chr2:7900589-7900322 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 142, 23

Conread position: 902-1140
Cow position: chr2:16284524-16284275 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 122, 142

Conread position: 902-1149
Cow position: chr2:46945114-46944858 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 927-1136
Cow position: chr2:52629750-52629964 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 142

Conread position: 936-1141
Cow position: chr2:80495053-80494840 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 947-1140
Cow position: chr2:11728652-11728450 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 105

Conread position: 958-1149
Cow position: chr2:32435663-32435859 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 45

Show alignments to all cow chromosomes.