Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01E040098.5 |
| Conread position: | 1-200 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 146 |
| Conread position: | 1-210 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 1-264 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 104 |
| Conread position: | 1-270 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 218 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 49, 146 |
| Conread position: | 1-291 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 1-295 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 63, 150 |
| Conread position: | 1-327 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 146 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 99 |
| Conread position: | 1-376 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 1-418 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 1-435 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 151 |
| Conread position: | 1-520 |
| Cow position: | |
| Alignm length: | 535 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 1-534 |
| Cow position: | |
| Alignm length: | 545 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 129 |
| Conread position: | 1-534 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 297 |
| Conread position: | 1-535 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 357 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 408, 35 |
| Conread position: | 1-536 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 149 |
| Conread position: | 1-617 |
| Cow position: | |
| Alignm length: | 629 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 466, 141 |
| Conread position: | 1-633 |
| Cow position: | |
| Alignm length: | 638 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 1-637 |
| Cow position: | |
| Alignm length: | 656 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 151 |
| Conread position: | 1-697 |
| Cow position: | |
| Alignm length: | 716 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 146 |
| Conread position: | 1-738 |
| Cow position: | |
| Alignm length: | 776 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 1-742 |
| Cow position: | |
| Alignm length: | 754 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 95 |
| Conread position: | 1-749 |
| Cow position: | |
| Alignm length: | 783 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 1-889 |
| Cow position: | |
| Alignm length: | 927 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 146 |
| Conread position: | 2-317 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 150 |
| Conread position: | 2-437 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 55 |
| Conread position: | 2-585 |
| Cow position: | |
| Alignm length: | 610 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 2-889 |
| Cow position: | |
| Alignm length: | 935 |
| Alignm identity: | 603 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 152 |
| Conread position: | 3-633 |
| Cow position: | |
| Alignm length: | 645 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 148 |
| Conread position: | 5-307 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 6-603 |
| Cow position: | |
| Alignm length: | 610 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 7-834 |
| Cow position: | |
| Alignm length: | 869 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 149 |
| Conread position: | 7-888 |
| Cow position: | |
| Alignm length: | 942 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 184 |
| Conread position: | 11-492 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 11-515 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 445, 136 |
| Conread position: | 11-516 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 41 |
| Conread position: | 11-634 |
| Cow position: | |
| Alignm length: | 636 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 11-657 |
| Cow position: | |
| Alignm length: | 657 |
| Alignm identity: | 384 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 12-540 |
| Cow position: | |
| Alignm length: | 535 |
| Alignm identity: | 351 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 12-1146 |
| Cow position: | |
| Alignm length: | 1171 |
| Alignm identity: | 837 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 13-527 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 334 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 56, 49 |
| Conread position: | 14-405 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 16-348 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 16-891 |
| Cow position: | |
| Alignm length: | 897 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 22-267 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 118 |
| Conread position: | 23-330 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 23-370 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 23-565 |
| Cow position: | |
| Alignm length: | 557 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 26-633 |
| Cow position: | |
| Alignm length: | 616 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 28-307 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 118 |
| Conread position: | 33-456 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 33-912 |
| Cow position: | |
| Alignm length: | 923 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 111 |
| Conread position: | 56-335 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 202, 64 |
| Conread position: | 56-535 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 24 |
| Conread position: | 57-330 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 65-634 |
| Cow position: | |
| Alignm length: | 582 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 85 |
| Conread position: | 88-911 |
| Cow position: | |
| Alignm length: | 859 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 62 |
| Conread position: | 103-574 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 47 |
| Conread position: | 104-631 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 20 |
| Conread position: | 108-536 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 42 |
| Conread position: | 150-326 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 150-520 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 207-565 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 207-631 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 218-614 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 230, 68 |
| Conread position: | 219-911 |
| Cow position: | |
| Alignm length: | 708 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 237-669 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 230, 297 |
| Conread position: | 245-525 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 203, 43 |
| Conread position: | 253-729 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 208 |
| Conread position: | 306-911 |
| Cow position: | |
| Alignm length: | 623 |
| Alignm identity: | 384 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 11, 194 |
| Conread position: | 310-520 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 156, 29 |
| Conread position: | 340-690 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 341-889 |
| Cow position: | |
| Alignm length: | 570 |
| Alignm identity: | 348 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 440 |
| Conread position: | 391-751 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 140 |
| Conread position: | 542-1152 |
| Cow position: | |
| Alignm length: | 637 |
| Alignm identity: | 409 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 19, 191 |
| Conread position: | 563-1131 |
| Cow position: | |
| Alignm length: | 573 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 608-1140 |
| Cow position: | |
| Alignm length: | 551 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 642-1126 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 705-1134 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 144 |
| Conread position: | 739-1149 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 784-1146 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 16 |
| Conread position: | 865-1137 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 927-1111 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 927-1111 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.