Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01E040098.5 |
| Conread position: | 1-131 |
| Cow position: | chr6:59741227-59741359 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-152 |
| Cow position: | chr6:41552845-41552697 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-160 |
| Cow position: | chr6:37115962-37115797 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-267 |
| Cow position: | chr6:59919455-59919718 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 151 |
| Conread position: | 1-271 |
| Cow position: | chr6:58409089-58409356 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 1-277 |
| Cow position: | chr6:35420757-35421014 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-286 |
| Cow position: | chr6:65927760-65927482 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 1-323 |
| Cow position: | chr6:1384022-1384342 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 1-325 |
| Cow position: | chr6:6566436-6566110 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 153 |
| Conread position: | 1-362 |
| Cow position: | chr6:42723101-42723452 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 112 |
| Conread position: | 1-452 |
| Cow position: | chr6:16672209-16671769 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 51, 140 |
| Conread position: | 1-503 |
| Cow position: | chr6:65900095-65900587 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 38 |
| Conread position: | 1-511 |
| Cow position: | chr6:10054437-10053961 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 1-525 |
| Cow position: | chr6:1405413-1405954 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-527 |
| Cow position: | chr6:51190363-51189831 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 353 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 123 |
| Conread position: | 1-539 |
| Cow position: | chr6:7179855-7180367 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 469, 66 |
| Conread position: | 1-565 |
| Cow position: | chr6:28491690-28492269 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-628 |
| Cow position: | chr6:42927208-42926608 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 198 |
| Conread position: | 1-633 |
| Cow position: | chr6:2402073-2401449 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 1-633 |
| Cow position: | chr6:19453746-19453137 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 455, 51 |
| Conread position: | 1-687 |
| Cow position: | chr6:11277877-11278545 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 465, 69 |
| Conread position: | 1-694 |
| Cow position: | chr6:45672088-45671366 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 1-749 |
| Cow position: | chr6:40275082-40274300 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-753 |
| Cow position: | chr6:38232099-38231340 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 1-887 |
| Cow position: | chr6:13846871-13845974 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 1-888 |
| Cow position: | chr6:44028871-44027960 (view UCSC Genome Browser custom track) |
| Alignm length: | 922 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 150 |
| Conread position: | 1-889 |
| Cow position: | chr6:13978346-13977446 (view UCSC Genome Browser custom track) |
| Alignm length: | 909 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 145 |
| Conread position: | 1-889 |
| Cow position: | chr6:26671040-26671964 (view UCSC Genome Browser custom track) |
| Alignm length: | 932 |
| Alignm identity: | 590 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 1-889 |
| Cow position: | chr6:27169400-27168480 (view UCSC Genome Browser custom track) |
| Alignm length: | 929 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 167 |
| Conread position: | 1-889 |
| Cow position: | chr6:28063161-28062266 (view UCSC Genome Browser custom track) |
| Alignm length: | 919 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 149 |
| Conread position: | 1-911 |
| Cow position: | chr6:331642-332600 (view UCSC Genome Browser custom track) |
| Alignm length: | 962 |
| Alignm identity: | 609 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 489 |
| Conread position: | 1-911 |
| Cow position: | chr6:2554531-2553592 (view UCSC Genome Browser custom track) |
| Alignm length: | 951 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-911 |
| Cow position: | chr6:7141648-7142580 (view UCSC Genome Browser custom track) |
| Alignm length: | 950 |
| Alignm identity: | 615 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-911 |
| Cow position: | chr6:17598456-17599398 (view UCSC Genome Browser custom track) |
| Alignm length: | 946 |
| Alignm identity: | 600 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 1-911 |
| Cow position: | chr6:34127172-34126221 (view UCSC Genome Browser custom track) |
| Alignm length: | 959 |
| Alignm identity: | 610 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 1-911 |
| Cow position: | chr6:57870180-57871122 (view UCSC Genome Browser custom track) |
| Alignm length: | 950 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-911 |
| Cow position: | chr6:68026605-68025661 (view UCSC Genome Browser custom track) |
| Alignm length: | 949 |
| Alignm identity: | 609 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 173 |
| Conread position: | 1-1010 |
| Cow position: | chr6:12093039-12094041 (view UCSC Genome Browser custom track) |
| Alignm length: | 1029 |
| Alignm identity: | 716 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 455, 54 |
| Conread position: | 1-1146 |
| Cow position: | chr6:6476630-6477753 (view UCSC Genome Browser custom track) |
| Alignm length: | 1159 |
| Alignm identity: | 852 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 2-263 |
| Cow position: | chr6:8761478-8761741 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-286 |
| Cow position: | chr6:33388656-33388355 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2-314 |
| Cow position: | chr6:29311313-29311003 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 80 |
| Conread position: | 2-503 |
| Cow position: | chr6:30275356-30275842 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 149 |
| Conread position: | 2-518 |
| Cow position: | chr6:21686714-21686214 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 38 |
| Conread position: | 2-545 |
| Cow position: | chr6:39437463-39436926 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 57 |
| Conread position: | 2-593 |
| Cow position: | chr6:35876896-35877489 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 150 |
| Conread position: | 2-613 |
| Cow position: | chr6:8201555-8200944 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-614 |
| Cow position: | chr6:3488578-3489180 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 2-614 |
| Cow position: | chr6:50497636-50498237 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 102 |
| Conread position: | 2-634 |
| Cow position: | chr6:913451-912824 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 2-634 |
| Cow position: | chr6:1823427-1824048 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 149 |
| Conread position: | 2-634 |
| Cow position: | chr6:5951414-5952045 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 145 |
| Conread position: | 2-634 |
| Cow position: | chr6:15141353-15141972 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 151 |
| Conread position: | 2-634 |
| Cow position: | chr6:34893187-34893819 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-634 |
| Cow position: | chr6:36525865-36525238 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 145 |
| Conread position: | 2-634 |
| Cow position: | chr6:47043609-47044242 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 145 |
| Conread position: | 2-634 |
| Cow position: | chr6:55544504-55545138 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-634 |
| Cow position: | chr6:65841417-65840777 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 158 |
| Conread position: | 2-749 |
| Cow position: | chr6:44150735-44151493 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 152 |
| Conread position: | 2-834 |
| Cow position: | chr6:2374526-2373670 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 3-250 |
| Cow position: | chr6:63198322-63198564 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-291 |
| Cow position: | chr6:68362498-68362783 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 3-432 |
| Cow position: | chr6:60384809-60384364 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 286 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 289, 22 |
| Conread position: | 3-534 |
| Cow position: | chr6:15280720-15281242 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 6-265 |
| Cow position: | chr6:34203334-34203070 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 173 |
| Conread position: | 6-291 |
| Cow position: | chr6:50138437-50138160 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 158, 71 |
| Conread position: | 6-665 |
| Cow position: | chr6:64714934-64714278 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 141 |
| Conread position: | 7-370 |
| Cow position: | chr6:40314719-40314370 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 7-524 |
| Cow position: | chr6:39162016-39161525 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 456, 6 |
| Conread position: | 7-720 |
| Cow position: | chr6:43617535-43616784 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 178 |
| Conread position: | 11-152 |
| Cow position: | chr6:2886036-2885891 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 11-258 |
| Cow position: | chr6:28474520-28474274 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 11-278 |
| Cow position: | chr6:42564757-42564492 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 132 |
| Conread position: | 11-314 |
| Cow position: | chr6:17045875-17045572 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 11-337 |
| Cow position: | chr6:52804228-52803907 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 11-338 |
| Cow position: | chr6:13943725-13943398 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 11-478 |
| Cow position: | chr6:3889666-3890134 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 11-503 |
| Cow position: | chr6:13103871-13103355 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 11-503 |
| Cow position: | chr6:30478905-30478413 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 419, 44 |
| Conread position: | 11-518 |
| Cow position: | chr6:27469068-27468584 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 11-613 |
| Cow position: | chr6:20561296-20561892 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 11-631 |
| Cow position: | chr6:65007651-65007072 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 44 |
| Conread position: | 11-634 |
| Cow position: | chr6:3278137-3278757 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 143 |
| Conread position: | 11-634 |
| Cow position: | chr6:64713357-64712742 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 11-749 |
| Cow position: | chr6:65822313-65823054 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 243 |
| Conread position: | 11-889 |
| Cow position: | chr6:39907963-39907058 (view UCSC Genome Browser custom track) |
| Alignm length: | 917 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 143 |
| Conread position: | 11-891 |
| Cow position: | chr6:65909240-65908333 (view UCSC Genome Browser custom track) |
| Alignm length: | 922 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 143 |
| Conread position: | 12-614 |
| Cow position: | chr6:27530190-27530784 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 13-493 |
| Cow position: | chr6:28509438-28508971 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 307 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 40, 139 |
| Conread position: | 14-266 |
| Cow position: | chr6:10558845-10559081 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 16-503 |
| Cow position: | chr6:28274792-28274320 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 432, 73 |
| Conread position: | 18-718 |
| Cow position: | chr6:66231612-66230928 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 36 |
| Conread position: | 23-306 |
| Cow position: | chr6:701755-701470 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 131 |
| Conread position: | 23-649 |
| Cow position: | chr6:43794907-43795550 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 132 |
| Conread position: | 24-525 |
| Cow position: | chr6:21971474-21970979 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 24-672 |
| Cow position: | chr6:6935324-6936007 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 25-634 |
| Cow position: | chr6:24238847-24238241 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 25-657 |
| Cow position: | chr6:41757186-41757850 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 51-525 |
| Cow position: | chr6:65880634-65880163 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 11 |
| Conread position: | 52-637 |
| Cow position: | chr6:51748-52323 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 98 |
| Conread position: | 55-506 |
| Cow position: | chr6:33459352-33458897 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 314 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 56-294 |
| Cow position: | chr6:11401400-11401161 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 56-531 |
| Cow position: | chr6:25357437-25356973 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 319, 82 |
| Conread position: | 60-418 |
| Cow position: | chr6:66194218-66194571 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 304, 11 |
| Conread position: | 69-330 |
| Cow position: | chr6:28106016-28106275 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 224, 11 |
| Conread position: | 73-435 |
| Cow position: | chr6:52736149-52735795 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 79-370 |
| Cow position: | chr6:21836358-21836659 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 104 |
| Conread position: | 110-634 |
| Cow position: | chr6:2111246-2111755 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 40 |
| Conread position: | 114-489 |
| Cow position: | chr6:13317980-13318337 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-360 |
| Cow position: | chr6:10640482-10640264 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 179, 21 |
| Conread position: | 144-634 |
| Cow position: | chr6:40554936-40555420 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 23 |
| Conread position: | 153-493 |
| Cow position: | chr6:37477911-37477571 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 87 |
| Conread position: | 155-889 |
| Cow position: | chr6:734835-734077 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 661 |
| Conread position: | 166-1099 |
| Cow position: | chr6:47958760-47957864 (view UCSC Genome Browser custom track) |
| Alignm length: | 957 |
| Alignm identity: | 664 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 131 |
| Conread position: | 177-323 |
| Cow position: | chr6:2885891-2885746 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 179-535 |
| Cow position: | chr6:66538970-66538629 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 283, 77 |
| Conread position: | 179-536 |
| Cow position: | chr6:62489067-62489417 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 287, 79 |
| Conread position: | 183-445 |
| Cow position: | chr6:476734-476486 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 218-692 |
| Cow position: | chr6:33794718-33795225 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 402 |
| Conread position: | 221-542 |
| Cow position: | chr6:4904449-4904758 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 29 |
| Conread position: | 234-697 |
| Cow position: | chr6:62829310-62829770 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 312 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 223, 113 |
| Conread position: | 237-889 |
| Cow position: | chr6:8444092-8444753 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 398 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 230, 294 |
| Conread position: | 256-889 |
| Cow position: | chr6:58409467-58410111 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 394 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 211, 554 |
| Conread position: | 267-631 |
| Cow position: | chr6:10559061-10559414 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 128, 26 |
| Conread position: | 298-631 |
| Cow position: | chr6:13276113-13275789 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 121, 51 |
| Conread position: | 340-564 |
| Cow position: | chr6:65927174-65926950 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 189 |
| Conread position: | 351-823 |
| Cow position: | chr6:21836661-21837148 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 314 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 116, 6 |
| Conread position: | 351-911 |
| Cow position: | chr6:13943350-13942782 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 357 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 116, 253 |
| Conread position: | 358-534 |
| Cow position: | chr6:17045439-17045263 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 114, 128 |
| Conread position: | 465-821 |
| Cow position: | chr6:22852585-22852949 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 340 |
| Conread position: | 531-1053 |
| Cow position: | chr6:4904879-4905405 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 253 |
| Conread position: | 536-1051 |
| Cow position: | chr6:65900753-65901286 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 351 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 176 |
| Conread position: | 687-1146 |
| Cow position: | chr6:26490846-26490395 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 219 |
| Conread position: | 705-1141 |
| Cow position: | chr6:59921085-59921519 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 148 |
| Conread position: | 710-884 |
| Cow position: | chr6:6100801-6100976 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 721-1141 |
| Cow position: | chr6:13275755-13275343 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 107 |
| Conread position: | 742-1133 |
| Cow position: | chr6:10639676-10639276 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 809-1152 |
| Cow position: | chr6:38231334-38230990 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 93 |
| Conread position: | 944-1140 |
| Cow position: | chr6:6100996-6101194 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 116 |
Show alignments to all cow chromosomes.