Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01E040098.5 |
| Conread position: | 1-174 |
| Cow position: | chr9:13220074-13219898 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 64, 153 |
| Conread position: | 1-258 |
| Cow position: | chr9:60651711-60651968 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 63, 153 |
| Conread position: | 1-264 |
| Cow position: | chr9:34106965-34107231 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 1-269 |
| Cow position: | chr9:26712567-26712834 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 1-287 |
| Cow position: | chr9:1979692-1979413 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 1-288 |
| Cow position: | chr9:36724254-36723967 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 146 |
| Conread position: | 1-307 |
| Cow position: | chr9:1294063-1294367 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 1-307 |
| Cow position: | chr9:52570413-52570121 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 1-326 |
| Cow position: | chr9:2052204-2051886 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 1-326 |
| Cow position: | chr9:31776700-31776374 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 144 |
| Conread position: | 1-421 |
| Cow position: | chr9:25483626-25483203 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 172 |
| Conread position: | 1-493 |
| Cow position: | chr9:55617096-55616624 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 126 |
| Conread position: | 1-515 |
| Cow position: | chr9:54360356-54359851 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 465, 142 |
| Conread position: | 1-631 |
| Cow position: | chr9:10315121-10314536 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 1-633 |
| Cow position: | chr9:15072269-15071659 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 154 |
| Conread position: | 1-660 |
| Cow position: | chr9:59174404-59175061 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1-702 |
| Cow position: | chr9:1076446-1077172 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-702 |
| Cow position: | chr9:34242845-34243580 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 1-825 |
| Cow position: | chr9:25755453-25756308 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 150 |
| Conread position: | 1-826 |
| Cow position: | chr9:781049-781906 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 163 |
| Conread position: | 1-888 |
| Cow position: | chr9:16268114-16267192 (view UCSC Genome Browser custom track) |
| Alignm length: | 928 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 154 |
| Conread position: | 1-890 |
| Cow position: | chr9:59443605-59442712 (view UCSC Genome Browser custom track) |
| Alignm length: | 915 |
| Alignm identity: | 639 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 132 |
| Conread position: | 1-891 |
| Cow position: | chr9:2488218-2489132 (view UCSC Genome Browser custom track) |
| Alignm length: | 927 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1-891 |
| Cow position: | chr9:31194414-31195329 (view UCSC Genome Browser custom track) |
| Alignm length: | 926 |
| Alignm identity: | 590 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 146 |
| Conread position: | 1-911 |
| Cow position: | chr9:4672360-4671417 (view UCSC Genome Browser custom track) |
| Alignm length: | 948 |
| Alignm identity: | 619 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1-911 |
| Cow position: | chr9:27933847-27932901 (view UCSC Genome Browser custom track) |
| Alignm length: | 952 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 2-248 |
| Cow position: | chr9:32968493-32968244 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 151 |
| Conread position: | 2-279 |
| Cow position: | chr9:18836530-18836260 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 2-282 |
| Cow position: | chr9:28677729-28677445 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 9, 155 |
| Conread position: | 2-314 |
| Cow position: | chr9:4532246-4531932 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 155 |
| Conread position: | 2-371 |
| Cow position: | chr9:29028477-29028848 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 2-493 |
| Cow position: | chr9:52290391-52289897 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 321 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 113, 50 |
| Conread position: | 2-566 |
| Cow position: | chr9:42568622-42568062 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 149 |
| Conread position: | 2-597 |
| Cow position: | chr9:2199859-2199272 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 86 |
| Conread position: | 2-614 |
| Cow position: | chr9:28021299-28020688 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 2-633 |
| Cow position: | chr9:37129786-37130392 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 2-634 |
| Cow position: | chr9:2170807-2170174 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 2-634 |
| Cow position: | chr9:3548421-3549050 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 149 |
| Conread position: | 2-634 |
| Cow position: | chr9:6051295-6051918 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 446, 44 |
| Conread position: | 2-634 |
| Cow position: | chr9:6830798-6831417 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 21 |
| Conread position: | 2-634 |
| Cow position: | chr9:7002305-7001673 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 2-634 |
| Cow position: | chr9:10321574-10320947 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 2-634 |
| Cow position: | chr9:30672122-30671485 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 2-634 |
| Cow position: | chr9:31807289-31806658 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 149 |
| Conread position: | 2-634 |
| Cow position: | chr9:37163056-37163685 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 152 |
| Conread position: | 2-634 |
| Cow position: | chr9:37971455-37972088 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 2-634 |
| Cow position: | chr9:47001956-47001340 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 2-634 |
| Cow position: | chr9:59535849-59535222 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 2-635 |
| Cow position: | chr9:59455847-59456479 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 152 |
| Conread position: | 2-635 |
| Cow position: | chr9:59482920-59483546 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 60 |
| Conread position: | 2-911 |
| Cow position: | chr9:1252213-1253137 (view UCSC Genome Browser custom track) |
| Alignm length: | 933 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 147 |
| Conread position: | 3-228 |
| Cow position: | chr9:2065457-2065685 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 60, 154 |
| Conread position: | 3-476 |
| Cow position: | chr9:22702100-22702580 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 3-630 |
| Cow position: | chr9:31020561-31019935 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 345 |
| Conread position: | 7-648 |
| Cow position: | chr9:222801-223450 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 161 |
| Conread position: | 7-705 |
| Cow position: | chr9:46626052-46626782 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 11-257 |
| Cow position: | chr9:22650894-22650650 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 11-264 |
| Cow position: | chr9:7646461-7646713 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 11-269 |
| Cow position: | chr9:3567110-3567370 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 11-270 |
| Cow position: | chr9:3155775-3155526 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 11-270 |
| Cow position: | chr9:35657706-35657449 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 11-286 |
| Cow position: | chr9:792770-793039 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 11-298 |
| Cow position: | chr9:829817-830098 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 11-314 |
| Cow position: | chr9:60278279-60278585 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 143 |
| Conread position: | 11-327 |
| Cow position: | chr9:59510349-59510025 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 310 |
| Conread position: | 11-366 |
| Cow position: | chr9:2185704-2185343 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 11-370 |
| Cow position: | chr9:163747-164108 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 11-380 |
| Cow position: | chr9:2500553-2500927 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 11-446 |
| Cow position: | chr9:27034450-27034027 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 142 |
| Conread position: | 11-522 |
| Cow position: | chr9:5003756-5003249 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 143 |
| Conread position: | 11-525 |
| Cow position: | chr9:42309426-42308913 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 143 |
| Conread position: | 11-539 |
| Cow position: | chr9:4984517-4984002 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 11-614 |
| Cow position: | chr9:18509981-18510581 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 11-632 |
| Cow position: | chr9:16175510-16174892 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 11-634 |
| Cow position: | chr9:9012852-9012233 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 5 |
| Conread position: | 11-635 |
| Cow position: | chr9:29629004-29629630 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 143 |
| Conread position: | 11-681 |
| Cow position: | chr9:831691-832372 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 11-888 |
| Cow position: | chr9:17064655-17065549 (view UCSC Genome Browser custom track) |
| Alignm length: | 915 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 89 |
| Conread position: | 11-911 |
| Cow position: | chr9:45873092-45872154 (view UCSC Genome Browser custom track) |
| Alignm length: | 948 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 12-529 |
| Cow position: | chr9:64118573-64118100 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 12-614 |
| Cow position: | chr9:417789-418388 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 142 |
| Conread position: | 13-326 |
| Cow position: | chr9:3867763-3868073 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 13-326 |
| Cow position: | chr9:9577340-9577032 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 13-431 |
| Cow position: | chr9:39992660-39992268 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 13-536 |
| Cow position: | chr9:6757313-6756797 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 133 |
| Conread position: | 13-634 |
| Cow position: | chr9:51182970-51183595 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 14-911 |
| Cow position: | chr9:50789306-50788363 (view UCSC Genome Browser custom track) |
| Alignm length: | 952 |
| Alignm identity: | 610 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 140 |
| Conread position: | 16-889 |
| Cow position: | chr9:3006536-3007435 (view UCSC Genome Browser custom track) |
| Alignm length: | 922 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 139 |
| Conread position: | 16-889 |
| Cow position: | chr9:33834535-33835440 (view UCSC Genome Browser custom track) |
| Alignm length: | 911 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 138 |
| Conread position: | 17-256 |
| Cow position: | chr9:131458-131708 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 22-435 |
| Cow position: | chr9:2630249-2629847 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 124 |
| Conread position: | 24-565 |
| Cow position: | chr9:28626302-28626805 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 31-834 |
| Cow position: | chr9:12401967-12401138 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 116 |
| Conread position: | 41-256 |
| Cow position: | chr9:651378-651597 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 98, 146 |
| Conread position: | 55-271 |
| Cow position: | chr9:7062411-7062625 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 55-614 |
| Cow position: | chr9:1996225-1996769 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 95 |
| Conread position: | 56-291 |
| Cow position: | chr9:3585996-3585764 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 58-524 |
| Cow position: | chr9:3938099-3938542 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 104 |
| Conread position: | 85-303 |
| Cow position: | chr9:8166327-8166554 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 100-634 |
| Cow position: | chr9:10855850-10855314 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 129-631 |
| Cow position: | chr9:8969422-8969914 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 21 |
| Conread position: | 148-518 |
| Cow position: | chr9:20310111-20310474 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 172, 85 |
| Conread position: | 154-469 |
| Cow position: | chr9:42904078-42904372 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 160-535 |
| Cow position: | chr9:4027491-4027863 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 239, 172 |
| Conread position: | 207-633 |
| Cow position: | chr9:34991214-34990800 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 220-1146 |
| Cow position: | chr9:3803063-3802128 (view UCSC Genome Browser custom track) |
| Alignm length: | 962 |
| Alignm identity: | 686 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 237-669 |
| Cow position: | chr9:164180-164625 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 115 |
| Conread position: | 244-634 |
| Cow position: | chr9:22650432-22650043 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 204, 87 |
| Conread position: | 248-522 |
| Cow position: | chr9:34107348-34107617 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 219, 49 |
| Conread position: | 253-614 |
| Cow position: | chr9:32967982-32967617 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 256-911 |
| Cow position: | chr9:51201675-51201009 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 403 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 211, 17 |
| Conread position: | 263-533 |
| Cow position: | chr9:13219857-13219591 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 203, 52 |
| Conread position: | 290-889 |
| Cow position: | chr9:132462-133064 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 296-634 |
| Cow position: | chr9:6249605-6249271 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 138, 29 |
| Conread position: | 300-633 |
| Cow position: | chr9:3155525-3155200 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 166, 49 |
| Conread position: | 302-888 |
| Cow position: | chr9:28677118-28676520 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 152 |
| Conread position: | 333-605 |
| Cow position: | chr9:1294453-1294732 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 130, 191 |
| Conread position: | 347-891 |
| Cow position: | chr9:2067685-2068245 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 343 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 466 |
| Conread position: | 351-911 |
| Cow position: | chr9:51210747-51210174 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 350 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 116, 453 |
| Conread position: | 352-829 |
| Cow position: | chr9:36723596-36723111 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 298 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 115, 127 |
| Conread position: | 358-634 |
| Cow position: | chr9:4531601-4531316 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 235 |
| Conread position: | 358-634 |
| Cow position: | chr9:60279158-60279445 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 86, 237 |
| Conread position: | 372-911 |
| Cow position: | chr9:25483201-25482652 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 339 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 90, 162 |
| Conread position: | 441-920 |
| Cow position: | chr9:18002570-18002087 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 466-738 |
| Cow position: | chr9:46158782-46159055 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 102, 113 |
| Conread position: | 466-752 |
| Cow position: | chr9:2501062-2501353 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 137 |
| Conread position: | 546-967 |
| Cow position: | chr9:11321701-11321274 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 612-1145 |
| Cow position: | chr9:13219389-13218825 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 295 |
| Conread position: | 717-1149 |
| Cow position: | chr9:12421885-12421466 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 721-1146 |
| Cow position: | chr9:832383-832811 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 902-1140 |
| Cow position: | chr9:29358940-29358694 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 918-1146 |
| Cow position: | chr9:28627439-28627671 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 49 |
| Conread position: | 934-1146 |
| Cow position: | chr9:18002095-18001878 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 936-1134 |
| Cow position: | chr9:10314317-10314113 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 126 |
Show alignments to all cow chromosomes.