Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-176 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 1-185 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 1-244 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-269 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 90, 255 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 107, 177 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 127, 74 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 74, 177 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 188 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 96, 47 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 159 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 1-272 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 7-270 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 244 |
| Conread position: | 10-271 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 101 |
| Conread position: | 33-271 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 174 |
| Conread position: | 41-271 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 100-269 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 129-271 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 529-958 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 529-1068 |
| Cow position: | |
| Alignm length: | 553 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 531-785 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-831 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-838 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 531-891 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 142, 35 |
| Conread position: | 531-914 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 531-1001 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 531-1019 |
| Cow position: | |
| Alignm length: | 494 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 531-1057 |
| Cow position: | |
| Alignm length: | 543 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 531-1059 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 237 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 552 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 226 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 553 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 547 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 228 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 276 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 531-1067 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 163 |
| Conread position: | 532-1021 |
| Cow position: | |
| Alignm length: | 497 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 291 |
| Conread position: | 532-1060 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 88 |
| Conread position: | 534-891 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 534-1043 |
| Cow position: | |
| Alignm length: | 529 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 360 |
| Conread position: | 534-1065 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 535-1060 |
| Cow position: | |
| Alignm length: | 545 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 535-1060 |
| Cow position: | |
| Alignm length: | 542 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 539-1057 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 215 |
| Conread position: | 542-1021 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 129, 165 |
| Conread position: | 543-1037 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 548-868 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 127, 263 |
| Conread position: | 548-1000 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 562-1057 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 29 |
| Conread position: | 563-1060 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 367 |
| Conread position: | 570-900 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 574-1060 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 130 |
| Conread position: | 586-1060 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 5, 35 |
| Conread position: | 591-1060 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 329 |
| Conread position: | 634-932 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 651-1060 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 379 |
| Conread position: | 670-1060 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 139 |
| Conread position: | 717-923 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 728-1021 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 734-1060 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 19 |
| Conread position: | 740-1018 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 62 |
| Conread position: | 777-979 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 127, 134 |
| Conread position: | 788-1060 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 797-1031 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 154, 55 |
| Conread position: | 807-1060 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 816-1057 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 96, 84 |
| Conread position: | 895-1060 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 895-1063 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 944-1058 |
| Cow position: | |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 80 |
Show alignments to all cow chromosomes.