Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-176 |
| Cow position: | chr13:26844238-26844423 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 101, 28 |
| Conread position: | 1-197 |
| Cow position: | chr13:34911013-34910808 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-223 |
| Cow position: | chr13:13324894-13325126 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-250 |
| Cow position: | chr13:3057965-3057704 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 68, 117 |
| Conread position: | 1-264 |
| Cow position: | chr13:34325412-34325138 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 25, 256 |
| Conread position: | 1-265 |
| Cow position: | chr13:30238397-30238672 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-268 |
| Cow position: | chr13:4941233-4941512 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 75, 110 |
| Conread position: | 1-268 |
| Cow position: | chr13:34937639-34937907 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 108 |
| Conread position: | 1-269 |
| Cow position: | chr13:34868894-34869172 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 115 |
| Conread position: | 1-271 |
| Cow position: | chr13:677008-677302 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-271 |
| Cow position: | chr13:1593005-1592723 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 87, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:3654169-3653891 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:4483947-4484228 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:6667968-6667689 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 103, 238 |
| Conread position: | 1-271 |
| Cow position: | chr13:9044652-9044934 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:13900017-13900298 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:15450961-15450682 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 100, 186 |
| Conread position: | 1-271 |
| Cow position: | chr13:15924232-15923950 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:17308620-17308901 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 92, 7 |
| Conread position: | 1-271 |
| Cow position: | chr13:20541885-20541609 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 206 |
| Conread position: | 1-271 |
| Cow position: | chr13:21840053-21839771 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-271 |
| Cow position: | chr13:23003157-23002876 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:30244533-30244251 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-271 |
| Cow position: | chr13:30303428-30303712 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 1-271 |
| Cow position: | chr13:30656830-30656554 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr13:31612157-31611872 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 272 |
| Conread position: | 1-271 |
| Cow position: | chr13:31733940-31733658 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-271 |
| Cow position: | chr13:32545528-32545810 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 117 |
| Conread position: | 1-271 |
| Cow position: | chr13:32737675-32737395 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 171 |
| Conread position: | 1-271 |
| Cow position: | chr13:32985201-32984922 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr13:33336271-33335997 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 1-271 |
| Cow position: | chr13:34042217-34041940 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-271 |
| Cow position: | chr13:35757393-35757675 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 117 |
| Conread position: | 1-271 |
| Cow position: | chr13:41316004-41316286 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:43982930-43982655 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 1-271 |
| Cow position: | chr13:47229856-47229574 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-271 |
| Cow position: | chr13:49973829-49974111 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:50109606-50109881 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 1-271 |
| Cow position: | chr13:58118763-58118481 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr13:60466481-60466757 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 162 |
| Conread position: | 26-265 |
| Cow position: | chr13:5625903-5625655 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 152 |
| Conread position: | 42-269 |
| Cow position: | chr13:35030730-35030965 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 44-271 |
| Cow position: | chr13:15520317-15520078 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 49-247 |
| Cow position: | chr13:18331607-18331817 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 129-271 |
| Cow position: | chr13:12063666-12063522 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 529-895 |
| Cow position: | chr13:34910447-34910083 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 32 |
| Conread position: | 529-1060 |
| Cow position: | chr13:15450697-15450164 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 531-669 |
| Cow position: | chr13:12063533-12063392 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-680 |
| Cow position: | chr13:41316275-41316428 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-732 |
| Cow position: | chr13:35030956-35031160 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 531-741 |
| Cow position: | chr13:31733669-31733455 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-884 |
| Cow position: | chr13:23002887-23002523 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 531-893 |
| Cow position: | chr13:30244262-30243898 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 302 |
| Conread position: | 531-913 |
| Cow position: | chr13:58118492-58118107 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 379 |
| Conread position: | 531-939 |
| Cow position: | chr13:34029832-34030240 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 146 |
| Conread position: | 531-1001 |
| Cow position: | chr13:20541620-20541160 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 107 |
| Conread position: | 531-1003 |
| Cow position: | chr13:3056718-3056241 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1043 |
| Cow position: | chr13:26844465-26844950 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 531-1046 |
| Cow position: | chr13:15520089-15519564 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 350 |
| Conread position: | 531-1058 |
| Cow position: | chr13:2388397-2387854 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 531-1058 |
| Cow position: | chr13:25692113-25692631 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 165 |
| Conread position: | 531-1058 |
| Cow position: | chr13:43982666-43982149 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 531-1058 |
| Cow position: | chr13:50109870-50110406 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 223 |
| Conread position: | 531-1058 |
| Cow position: | chr13:57024119-57024647 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 531-1059 |
| Cow position: | chr13:13900287-13900823 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 162 |
| Conread position: | 531-1060 |
| Cow position: | chr13:1592734-1592198 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 226 |
| Conread position: | 531-1060 |
| Cow position: | chr13:5625574-5625031 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 531-1060 |
| Cow position: | chr13:17308890-17309424 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 498 |
| Conread position: | 531-1060 |
| Cow position: | chr13:21839782-21839238 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 380 |
| Conread position: | 531-1060 |
| Cow position: | chr13:30303701-30304246 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 339 |
| Conread position: | 531-1060 |
| Cow position: | chr13:31556308-31555786 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 346 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 531-1060 |
| Cow position: | chr13:31611883-31611354 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 531-1060 |
| Cow position: | chr13:32737406-32736869 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 351 |
| Conread position: | 531-1060 |
| Cow position: | chr13:32984933-32984387 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr13:34937899-34938407 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 531-1060 |
| Cow position: | chr13:47229585-47229044 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 531-1060 |
| Cow position: | chr13:49974100-49974620 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 30 |
| Conread position: | 531-1060 |
| Cow position: | chr13:60466746-60467283 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 191 |
| Conread position: | 531-1060 |
| Cow position: | chr13:60700249-60699710 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 531-1062 |
| Cow position: | chr13:4484217-4484753 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 531-1062 |
| Cow position: | chr13:32545799-32546348 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 531-1064 |
| Cow position: | chr13:3653902-3653359 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1064 |
| Cow position: | chr13:15923961-15923422 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 531-1068 |
| Cow position: | chr13:5628388-5627866 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 354 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 531-1068 |
| Cow position: | chr13:16254962-16254419 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 532-933 |
| Cow position: | chr13:19440988-19441389 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 533-672 |
| Cow position: | chr13:11798477-11798339 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 533-1060 |
| Cow position: | chr13:34325137-34324599 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 534-1060 |
| Cow position: | chr13:6667697-6667176 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 133 |
| Conread position: | 534-1060 |
| Cow position: | chr13:42218504-42217956 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 512 |
| Conread position: | 535-1064 |
| Cow position: | chr13:4941811-4942343 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 193 |
| Conread position: | 537-920 |
| Cow position: | chr13:33335886-33335505 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 169 |
| Conread position: | 539-821 |
| Cow position: | chr13:19413914-19414183 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 539-1063 |
| Cow position: | chr13:6758408-6758935 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 540-1068 |
| Cow position: | chr13:14178407-14177879 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 554-1064 |
| Cow position: | chr13:34424204-34424722 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 555-903 |
| Cow position: | chr13:30238687-30239030 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 558-878 |
| Cow position: | chr13:677467-677785 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 558-1021 |
| Cow position: | chr13:34765998-34765547 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 60 |
| Conread position: | 563-1060 |
| Cow position: | chr13:9045238-9045722 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 585-994 |
| Cow position: | chr13:28670785-28670380 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 66 |
| Conread position: | 590-1035 |
| Cow position: | chr13:52646396-52645949 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 598-1058 |
| Cow position: | chr13:34041846-34041384 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 247 |
| Conread position: | 601-1060 |
| Cow position: | chr13:31730383-31729939 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 637-1060 |
| Cow position: | chr13:15543070-15543497 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 57 |
| Conread position: | 641-821 |
| Cow position: | chr13:48358238-48358419 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 667-1060 |
| Cow position: | chr13:17331204-17330806 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 31 |
| Conread position: | 675-1064 |
| Cow position: | chr13:11798145-11797759 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 177 |
| Conread position: | 689-1062 |
| Cow position: | chr13:35757852-35758241 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 690-1059 |
| Cow position: | chr13:34049319-34049695 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 216, 61 |
| Conread position: | 701-987 |
| Cow position: | chr13:12633160-12633437 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 102 |
| Conread position: | 701-1058 |
| Cow position: | chr13:30654789-30654425 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 702-1064 |
| Cow position: | chr13:21696844-21697212 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 721-1060 |
| Cow position: | chr13:34154149-34153802 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 187 |
| Conread position: | 728-1060 |
| Cow position: | chr13:44653194-44652862 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 736-930 |
| Cow position: | chr13:35031750-35031944 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 183, 170 |
| Conread position: | 750-1058 |
| Cow position: | chr13:31733249-31732935 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 159, 191 |
| Conread position: | 759-973 |
| Cow position: | chr13:25952746-25952958 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 191, 85 |
| Conread position: | 781-1060 |
| Cow position: | chr13:14402426-14402141 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 783-1060 |
| Cow position: | chr13:43590005-43590286 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 167 |
| Conread position: | 812-1060 |
| Cow position: | chr13:13325623-13325884 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 837-1021 |
| Cow position: | chr13:47861553-47861739 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 873-1060 |
| Cow position: | chr13:23002248-23002052 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 897-1060 |
| Cow position: | chr13:678537-678705 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 907-1060 |
| Cow position: | chr13:30239122-30239273 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 921-1060 |
| Cow position: | chr13:48358455-48358597 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 102 |
Show alignments to all cow chromosomes.