Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-126 |
| Cow position: | chr17:19269108-19268979 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 73, 110 |
| Conread position: | 1-207 |
| Cow position: | chr17:42265179-42265395 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 1-261 |
| Cow position: | chr17:15850657-15850929 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 117 |
| Conread position: | 1-263 |
| Cow position: | chr17:11376531-11376257 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-264 |
| Cow position: | chr17:250419-250695 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-265 |
| Cow position: | chr17:15156712-15156440 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 92, 253 |
| Conread position: | 1-269 |
| Cow position: | chr17:6119962-6120244 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 1-270 |
| Cow position: | chr17:3642577-3642299 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 74, 114 |
| Conread position: | 1-271 |
| Cow position: | chr17:151619-151339 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr17:228055-227773 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 124 |
| Conread position: | 1-271 |
| Cow position: | chr17:1382561-1382284 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr17:1880349-1880637 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 103, 42 |
| Conread position: | 1-271 |
| Cow position: | chr17:2262355-2262638 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 1-271 |
| Cow position: | chr17:2579874-2580157 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr17:5226876-5227157 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-271 |
| Cow position: | chr17:6068815-6069091 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 1-271 |
| Cow position: | chr17:6260102-6260384 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 117 |
| Conread position: | 1-271 |
| Cow position: | chr17:11087465-11087188 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 209 |
| Conread position: | 1-271 |
| Cow position: | chr17:14040776-14040499 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 74, 204 |
| Conread position: | 1-271 |
| Cow position: | chr17:14216773-14216499 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 127, 90 |
| Conread position: | 1-271 |
| Cow position: | chr17:14894413-14894695 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-271 |
| Cow position: | chr17:15143114-15142833 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr17:15324081-15324363 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 75, 110 |
| Conread position: | 1-271 |
| Cow position: | chr17:15436044-15436326 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr17:18103426-18103153 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 1-271 |
| Cow position: | chr17:20665473-20665190 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-271 |
| Cow position: | chr17:24029740-24029470 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 109, 83 |
| Conread position: | 1-271 |
| Cow position: | chr17:24782420-24782694 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 1-271 |
| Cow position: | chr17:31767786-31767507 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr17:34156381-34156652 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr17:40805077-40805351 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 191 |
| Conread position: | 1-272 |
| Cow position: | chr17:22132489-22132766 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 81, 234 |
| Conread position: | 2-271 |
| Cow position: | chr17:20087487-20087210 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 195 |
| Conread position: | 3-209 |
| Cow position: | chr17:2174143-2174350 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 124, 37 |
| Conread position: | 3-271 |
| Cow position: | chr17:4060360-4060634 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 90, 249 |
| Conread position: | 3-271 |
| Cow position: | chr17:8209361-8209642 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-271 |
| Cow position: | chr17:23324199-23323919 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 8-267 |
| Cow position: | chr17:20183690-20183951 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 8-268 |
| Cow position: | chr17:16857258-16856987 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 14-270 |
| Cow position: | chr17:3708509-3708241 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 23-271 |
| Cow position: | chr17:18300118-18299859 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 42-271 |
| Cow position: | chr17:9081146-9080905 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 153 |
| Conread position: | 129-271 |
| Cow position: | chr17:11783238-11783379 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 95, 127 |
| Conread position: | 129-271 |
| Cow position: | chr17:43988891-43989035 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 529-932 |
| Cow position: | chr17:15156449-15156044 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 306 |
| Conread position: | 529-1058 |
| Cow position: | chr17:14216512-14215969 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 224 |
| Conread position: | 531-663 |
| Cow position: | chr17:9080916-9080781 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 531-682 |
| Cow position: | chr17:1382295-1382140 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 531-740 |
| Cow position: | chr17:15371484-15371701 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 531-773 |
| Cow position: | chr17:28018912-28019158 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 531-782 |
| Cow position: | chr17:22132754-22133004 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 531-851 |
| Cow position: | chr17:18103164-18102843 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 226 |
| Conread position: | 531-908 |
| Cow position: | chr17:2169022-2169375 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 531-914 |
| Cow position: | chr17:227784-227403 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 531-948 |
| Cow position: | chr17:8209631-8210056 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-958 |
| Cow position: | chr17:181822-182252 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 346 |
| Conread position: | 531-972 |
| Cow position: | chr17:38874162-38874600 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 531-987 |
| Cow position: | chr17:3642309-3641850 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 226 |
| Conread position: | 531-999 |
| Cow position: | chr17:11783368-11783835 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 531-1004 |
| Cow position: | chr17:19020098-19020574 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 531-1021 |
| Cow position: | chr17:13705082-13705563 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 169 |
| Conread position: | 531-1052 |
| Cow position: | chr17:2247546-2247035 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 313 |
| Conread position: | 531-1055 |
| Cow position: | chr17:1657325-1656792 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 171 |
| Conread position: | 531-1056 |
| Cow position: | chr17:250689-251206 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 531-1058 |
| Cow position: | chr17:2580146-2580683 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 531-1058 |
| Cow position: | chr17:3708251-3707720 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 531-1058 |
| Cow position: | chr17:43989024-43989560 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 531-1060 |
| Cow position: | chr17:1880626-1881162 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 25 |
| Conread position: | 531-1060 |
| Cow position: | chr17:2262627-2263168 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 428 |
| Conread position: | 531-1060 |
| Cow position: | chr17:3655771-3655233 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 261 |
| Conread position: | 531-1060 |
| Cow position: | chr17:4060623-4061158 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 531-1060 |
| Cow position: | chr17:4942206-4941656 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 531-1060 |
| Cow position: | chr17:6069080-6069611 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 531-1060 |
| Cow position: | chr17:6120235-6120776 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr17:11087199-11086666 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 499 |
| Conread position: | 531-1060 |
| Cow position: | chr17:14040510-14039981 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 531-1060 |
| Cow position: | chr17:15142844-15142295 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 234 |
| Conread position: | 531-1060 |
| Cow position: | chr17:15324352-15324890 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 400 |
| Conread position: | 531-1060 |
| Cow position: | chr17:15436315-15436842 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 228 |
| Conread position: | 531-1060 |
| Cow position: | chr17:16856995-16856458 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 339 |
| Conread position: | 531-1060 |
| Cow position: | chr17:16899767-16899252 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 531-1060 |
| Cow position: | chr17:19268307-19267766 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr17:20099954-20099407 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 133 |
| Conread position: | 531-1060 |
| Cow position: | chr17:20402945-20403492 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 196 |
| Conread position: | 531-1060 |
| Cow position: | chr17:23323930-23323392 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 353 |
| Conread position: | 531-1060 |
| Cow position: | chr17:24029481-24028942 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr17:31767518-31766979 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr17:34156641-34157180 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 380 |
| Conread position: | 531-1064 |
| Cow position: | chr17:5227146-5227689 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 531-1064 |
| Cow position: | chr17:20081340-20080807 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 531-1064 |
| Cow position: | chr17:40805340-40805872 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 30 |
| Conread position: | 532-1056 |
| Cow position: | chr17:6000919-6000408 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 193 |
| Conread position: | 532-1060 |
| Cow position: | chr17:24782684-24783222 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 115 |
| Conread position: | 533-1068 |
| Cow position: | chr17:20087219-20086695 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 534-1060 |
| Cow position: | chr17:6260376-6260921 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 534-1062 |
| Cow position: | chr17:14894687-14895235 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 535-1057 |
| Cow position: | chr17:15851219-15851746 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 238 |
| Conread position: | 542-1060 |
| Cow position: | chr17:20488481-20489003 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 547-893 |
| Cow position: | chr17:20722162-20722507 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 558-1039 |
| Cow position: | chr17:18194366-18194841 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 558-1058 |
| Cow position: | chr17:6076763-6077247 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 316 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 113, 137 |
| Conread position: | 568-955 |
| Cow position: | chr17:42265531-42265912 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 568-1068 |
| Cow position: | chr17:2030684-2031194 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 359 |
| Conread position: | 598-1060 |
| Cow position: | chr17:22558581-22559030 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 599-774 |
| Cow position: | chr17:21780653-21780477 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 624-922 |
| Cow position: | chr17:11025893-11025598 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 43 |
| Conread position: | 630-860 |
| Cow position: | chr17:14307224-14306998 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 635-1028 |
| Cow position: | chr17:13990713-13990329 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 644-1065 |
| Cow position: | chr17:31532867-31533275 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 650-1060 |
| Cow position: | chr17:54808-54384 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 653-1058 |
| Cow position: | chr17:36548-36951 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 654-1055 |
| Cow position: | chr17:1787290-1786884 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 259 |
| Conread position: | 666-1066 |
| Cow position: | chr17:14240160-14240567 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 0 |
| Conread position: | 679-1060 |
| Cow position: | chr17:151223-150824 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 134 |
| Conread position: | 679-1060 |
| Cow position: | chr17:1704017-1703635 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 88 |
| Conread position: | 694-1060 |
| Cow position: | chr17:16121830-16121493 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 25 |
| Conread position: | 704-1060 |
| Cow position: | chr17:8202671-8203015 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 729-1064 |
| Cow position: | chr17:6611764-6611423 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 0 |
| Conread position: | 735-1064 |
| Cow position: | chr17:239074-239402 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 230 |
| Conread position: | 739-1057 |
| Cow position: | chr17:15371960-15372285 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 198 |
| Conread position: | 750-1060 |
| Cow position: | chr17:7942313-7942007 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 67, 59 |
| Conread position: | 812-1060 |
| Cow position: | chr17:22133008-22133259 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 836-1056 |
| Cow position: | chr17:21418412-21418629 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 83 |
| Conread position: | 842-1060 |
| Cow position: | chr17:9080589-9080361 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 192 |
| Conread position: | 863-1060 |
| Cow position: | chr17:2078141-2077935 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 864-1064 |
| Cow position: | chr17:20390226-20390022 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 8, 16 |
Show alignments to all cow chromosomes.