Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-263 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 1-269 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-270 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 1-270 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 87, 108 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 77, 196 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 232 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 93, 122 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 252 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 132, 75 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 75, 96 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 92, 125 |
| Conread position: | 1-272 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 1-272 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 3-271 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 4-271 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 5-268 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 86, 105 |
| Conread position: | 8-266 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 100, 60 |
| Conread position: | 10-271 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 81, 176 |
| Conread position: | 14-268 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 197 |
| Conread position: | 18-271 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 98 |
| Conread position: | 22-244 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 528-933 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 528-1060 |
| Cow position: | |
| Alignm length: | 542 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 247 |
| Conread position: | 529-1060 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 229 |
| Conread position: | 531-705 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-712 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 531-720 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-744 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-744 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-750 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 531-802 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 26, 127 |
| Conread position: | 531-913 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 261 |
| Conread position: | 531-933 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-960 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 531-1019 |
| Cow position: | |
| Alignm length: | 499 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1024 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 531-1042 |
| Cow position: | |
| Alignm length: | 547 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1043 |
| Cow position: | |
| Alignm length: | 532 |
| Alignm identity: | 337 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 531-1058 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 192 |
| Conread position: | 531-1058 |
| Cow position: | |
| Alignm length: | 542 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 531-1059 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 22 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 232 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 545 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 473 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 381 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 554 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 531-1062 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1064 |
| Cow position: | |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 531-1065 |
| Cow position: | |
| Alignm length: | 557 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 531-1065 |
| Cow position: | |
| Alignm length: | 556 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 532-820 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 24, 105 |
| Conread position: | 532-842 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 532-966 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 534-1060 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 534-1060 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 460 |
| Conread position: | 534-1060 |
| Cow position: | |
| Alignm length: | 536 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 535-1060 |
| Cow position: | |
| Alignm length: | 533 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 538-1060 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 538-1060 |
| Cow position: | |
| Alignm length: | 528 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 182 |
| Conread position: | 539-941 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 243 |
| Conread position: | 543-1054 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 555-1060 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 131 |
| Conread position: | 558-1006 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 559-1001 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 112, 166 |
| Conread position: | 560-830 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 560-1060 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 199 |
| Conread position: | 562-711 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 572-846 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 621-1060 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 99 |
| Conread position: | 626-966 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 288, 134 |
| Conread position: | 644-1060 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 666-1064 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 212 |
| Conread position: | 693-1058 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 256 |
| Conread position: | 695-1060 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 122, 334 |
| Conread position: | 700-951 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 140, 21 |
| Conread position: | 702-1068 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 53, 131 |
| Conread position: | 721-1060 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 148 |
| Conread position: | 723-1060 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 733-900 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 735-1067 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 738-1026 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 745-980 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 206, 108 |
| Conread position: | 763-1065 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 154 |
| Conread position: | 766-1056 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 766-1058 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 140, 155 |
| Conread position: | 796-1060 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 821-1060 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 95, 62 |
| Conread position: | 842-1057 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 848-1061 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 859-1060 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 884-1060 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.