Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-199 |
| Cow position: | chr24:6336310-6336506 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 129 |
| Conread position: | 1-223 |
| Cow position: | chr24:7061848-7062080 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 90, 117 |
| Conread position: | 1-227 |
| Cow position: | chr24:16472355-16472591 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 1-240 |
| Cow position: | chr24:12796754-12796518 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 1-240 |
| Cow position: | chr24:16648528-16648272 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 69 |
| Conread position: | 1-269 |
| Cow position: | chr24:19833846-19834123 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-269 |
| Cow position: | chr24:29187744-29188023 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 160 |
| Conread position: | 1-270 |
| Cow position: | chr24:4415069-4414798 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 1-270 |
| Cow position: | chr24:5992773-5992491 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-270 |
| Cow position: | chr24:12237693-12237977 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 202 |
| Conread position: | 1-270 |
| Cow position: | chr24:33738886-33738604 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-271 |
| Cow position: | chr24:148158-147875 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 1-271 |
| Cow position: | chr24:6024651-6024369 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr24:6084525-6084803 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr24:6646154-6646436 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr24:6660041-6659758 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-271 |
| Cow position: | chr24:9188277-9187999 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 106 |
| Conread position: | 1-271 |
| Cow position: | chr24:9544515-9544799 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 1-271 |
| Cow position: | chr24:12086660-12086939 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-271 |
| Cow position: | chr24:12130515-12130238 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 181 |
| Conread position: | 1-271 |
| Cow position: | chr24:12335315-12335024 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-271 |
| Cow position: | chr24:12484864-12484582 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 85, 117 |
| Conread position: | 1-271 |
| Cow position: | chr24:13188627-13188906 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 105, 211 |
| Conread position: | 1-271 |
| Cow position: | chr24:17696517-17696237 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 90, 194 |
| Conread position: | 1-271 |
| Cow position: | chr24:22793630-22793912 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr24:23505408-23505130 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 1-271 |
| Cow position: | chr24:29305869-29305586 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-271 |
| Cow position: | chr24:33933827-33934109 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-271 |
| Cow position: | chr24:36559301-36559021 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 90, 255 |
| Conread position: | 1-271 |
| Cow position: | chr24:43814218-43814499 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 92, 41 |
| Conread position: | 1-271 |
| Cow position: | chr24:44017987-44018268 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-1017 |
| Cow position: | chr24:40549327-40550347 (view UCSC Genome Browser custom track) |
| Alignm length: | 1031 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 2-265 |
| Cow position: | chr24:12110236-12109976 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 129, 27 |
| Conread position: | 2-269 |
| Cow position: | chr24:12205851-12205578 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 5, 81 |
| Conread position: | 2-270 |
| Cow position: | chr24:14754545-14754265 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 3-269 |
| Cow position: | chr24:22971549-22971827 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 72, 108 |
| Conread position: | 18-342 |
| Cow position: | chr24:9091807-9091458 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 331 |
| Conread position: | 26-271 |
| Cow position: | chr24:6328834-6328577 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 185 |
| Conread position: | 44-271 |
| Cow position: | chr24:19702003-19702220 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 54-271 |
| Cow position: | chr24:12700312-12700082 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 129-269 |
| Cow position: | chr24:8030881-8031023 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 129-271 |
| Cow position: | chr24:6435068-6435213 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 504-923 |
| Cow position: | chr24:14302177-14302600 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 265 |
| Conread position: | 529-1060 |
| Cow position: | chr24:12109985-12109443 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 529-1060 |
| Cow position: | chr24:17696252-17695719 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 529-1060 |
| Cow position: | chr24:29188010-29188553 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 529-1063 |
| Cow position: | chr24:44018255-44018771 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 265 |
| Conread position: | 529-1067 |
| Cow position: | chr24:40304758-40305294 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 531-680 |
| Cow position: | chr24:44326080-44326233 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-709 |
| Cow position: | chr24:21960227-21960045 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-716 |
| Cow position: | chr24:6538683-6538867 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 531-820 |
| Cow position: | chr24:6065000-6064708 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 531-828 |
| Cow position: | chr24:8031014-8031315 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-878 |
| Cow position: | chr24:12484593-12484242 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-933 |
| Cow position: | chr24:12162642-12163037 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 531-939 |
| Cow position: | chr24:12143615-12143203 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 531-970 |
| Cow position: | chr24:6646425-6646868 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1018 |
| Cow position: | chr24:36709083-36709582 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 531-1021 |
| Cow position: | chr24:38638259-38638752 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 531-1052 |
| Cow position: | chr24:9544788-9545315 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 141 |
| Conread position: | 531-1058 |
| Cow position: | chr24:5992501-5991967 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 531-1058 |
| Cow position: | chr24:6059624-6060157 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 157 |
| Conread position: | 531-1058 |
| Cow position: | chr24:6659769-6659238 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 223 |
| Conread position: | 531-1058 |
| Cow position: | chr24:12086928-12087467 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 224 |
| Conread position: | 531-1060 |
| Cow position: | chr24:4414808-4414273 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 276 |
| Conread position: | 531-1060 |
| Cow position: | chr24:6024380-6023845 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 207 |
| Conread position: | 531-1060 |
| Cow position: | chr24:6084792-6085323 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 270 |
| Conread position: | 531-1060 |
| Cow position: | chr24:6435202-6435743 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 333 |
| Conread position: | 531-1060 |
| Cow position: | chr24:7090245-7089707 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 531-1060 |
| Cow position: | chr24:8151534-8151026 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 151 |
| Conread position: | 531-1060 |
| Cow position: | chr24:12700093-12699557 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 472 |
| Conread position: | 531-1060 |
| Cow position: | chr24:13232978-13233518 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 531-1060 |
| Cow position: | chr24:19702209-19702758 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 531-1060 |
| Cow position: | chr24:23505141-23504602 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 503 |
| Conread position: | 531-1060 |
| Cow position: | chr24:29305597-29305053 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 224 |
| Conread position: | 531-1060 |
| Cow position: | chr24:40655775-40656305 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 531-1063 |
| Cow position: | chr24:14389811-14389270 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 531-1064 |
| Cow position: | chr24:9188010-9187478 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 464 |
| Conread position: | 531-1064 |
| Cow position: | chr24:19834114-19834661 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 531-1066 |
| Cow position: | chr24:147886-147342 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 340 |
| Conread position: | 532-842 |
| Cow position: | chr24:28210358-28210041 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 532-996 |
| Cow position: | chr24:37200282-37199818 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 533-910 |
| Cow position: | chr24:43814490-43814870 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 109 |
| Conread position: | 533-1021 |
| Cow position: | chr24:12205585-12205087 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 534-856 |
| Cow position: | chr24:14383861-14383542 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 534-1023 |
| Cow position: | chr24:13321899-13322374 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 303 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 534-1058 |
| Cow position: | chr24:12335032-12334498 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 534-1060 |
| Cow position: | chr24:6406756-6407295 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 534-1060 |
| Cow position: | chr24:22971821-22972353 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 534-1060 |
| Cow position: | chr24:33934101-33934649 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 134 |
| Conread position: | 534-1065 |
| Cow position: | chr24:9091317-9090786 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 535-1060 |
| Cow position: | chr24:13188899-13189447 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 538-1060 |
| Cow position: | chr24:14871580-14871060 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 23 |
| Conread position: | 541-864 |
| Cow position: | chr24:40193249-40193573 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 542-899 |
| Cow position: | chr24:6475678-6476031 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 129, 78 |
| Conread position: | 542-1058 |
| Cow position: | chr24:6337119-6337647 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 543-1060 |
| Cow position: | chr24:36559035-36558505 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 545-1065 |
| Cow position: | chr24:12129327-12128796 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 78 |
| Conread position: | 548-820 |
| Cow position: | chr24:39448896-39448625 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 123, 27 |
| Conread position: | 555-1057 |
| Cow position: | chr24:6332946-6332438 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 475 |
| Conread position: | 562-1060 |
| Cow position: | chr24:32846454-32846966 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 330 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 53, 138 |
| Conread position: | 566-1053 |
| Cow position: | chr24:19324684-19324198 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 131 |
| Conread position: | 567-973 |
| Cow position: | chr24:6049321-6049722 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 44 |
| Conread position: | 582-1060 |
| Cow position: | chr24:6328254-6327769 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 586-1058 |
| Cow position: | chr24:12150538-12150053 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 589-903 |
| Cow position: | chr24:29182934-29183250 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 623-945 |
| Cow position: | chr24:11866429-11866107 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 645-956 |
| Cow position: | chr24:34494315-34494006 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 305, 8 |
| Conread position: | 659-1056 |
| Cow position: | chr24:1450312-1450685 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 664-1019 |
| Cow position: | chr24:31006572-31006221 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 711-944 |
| Cow position: | chr24:27147618-27147852 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 207, 87 |
| Conread position: | 711-1000 |
| Cow position: | chr24:16097461-16097746 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 238, 107 |
| Conread position: | 712-1060 |
| Cow position: | chr24:14754581-14754949 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 157, 7 |
| Conread position: | 723-1018 |
| Cow position: | chr24:16876276-16875978 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 723-1058 |
| Cow position: | chr24:6129754-6130085 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 44 |
| Conread position: | 726-1068 |
| Cow position: | chr24:14881677-14881340 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 224, 65 |
| Conread position: | 727-1058 |
| Cow position: | chr24:6142018-6142345 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 224, 26 |
| Conread position: | 743-1064 |
| Cow position: | chr24:13044691-13044377 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 207, 7 |
| Conread position: | 746-1065 |
| Cow position: | chr24:17321646-17321979 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 770-1060 |
| Cow position: | chr24:17370994-17370712 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 144, 34 |
| Conread position: | 799-1068 |
| Cow position: | chr24:6353157-6353414 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 152, 25 |
| Conread position: | 811-1062 |
| Cow position: | chr24:35841062-35840799 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 815-1058 |
| Cow position: | chr24:6668795-6668559 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 136, 48 |
| Conread position: | 829-1060 |
| Cow position: | chr24:35869530-35869300 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 87, 112 |
| Conread position: | 859-1060 |
| Cow position: | chr24:17409533-17409740 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 874-1064 |
| Cow position: | chr24:30430683-30430879 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.