Cow genome map

Conread name: Ss1.1-Tra1-TCH01F020058.5

Conread position: 1-199
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 129

Conread position: 1-223
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 117

Conread position: 1-227
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 11

Conread position: 1-240
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 79

Conread position: 1-240
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 69

Conread position: 1-269
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 74, 110

Conread position: 1-269
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 160

Conread position: 1-270
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 92, 106

Conread position: 1-270
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 1-270
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 202

Conread position: 1-270
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 1-271
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 114

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 124

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 124

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 124

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 105, 0

Conread position: 1-271
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 106

Conread position: 1-271
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 11

Conread position: 1-271
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 1-271
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 181

Conread position: 1-271
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 85, 117

Conread position: 1-271
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 105, 211

Conread position: 1-271
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 90, 194

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 110

Conread position: 1-271
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 72

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 1-271
Cow position:
Alignm length: 283
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 1-271
Cow position:
Alignm length: 282
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 255

Conread position: 1-271
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 92, 41

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 90, 110

Conread position: 1-1017
Cow position:
Alignm length: 1031
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 28

Conread position: 2-265
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 129, 27

Conread position: 2-269
Cow position:
Alignm length: 281
Alignm identity: 192
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 81

Conread position: 2-270
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 3-269
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 108

Conread position: 18-342
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 331

Conread position: 26-271
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 185

Conread position: 44-271
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 88

Conread position: 54-271
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 64

Conread position: 129-269
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 129-271
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 10

Conread position: 504-923
Cow position:
Alignm length: 426
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 265

Conread position: 529-1060
Cow position:
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 65

Conread position: 529-1060
Cow position:
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 106

Conread position: 529-1060
Cow position:
Alignm length: 544
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 529-1063
Cow position:
Alignm length: 540
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 265

Conread position: 529-1067
Cow position:
Alignm length: 555
Alignm identity: 338
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 50

Conread position: 531-680
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 531-709
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 531-716
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 27

Conread position: 531-820
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 57

Conread position: 531-828
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 531-878
Cow position:
Alignm length: 352
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 531-933
Cow position:
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 25

Conread position: 531-939
Cow position:
Alignm length: 418
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 110

Conread position: 531-970
Cow position:
Alignm length: 444
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 531-1018
Cow position:
Alignm length: 516
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 46

Conread position: 531-1021
Cow position:
Alignm length: 501
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 111

Conread position: 531-1052
Cow position:
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 141

Conread position: 531-1058
Cow position:
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 82

Conread position: 531-1058
Cow position:
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 157

Conread position: 531-1058
Cow position:
Alignm length: 539
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 223

Conread position: 531-1058
Cow position:
Alignm length: 544
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 224

Conread position: 531-1060
Cow position:
Alignm length: 537
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 276

Conread position: 531-1060
Cow position:
Alignm length: 541
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 207

Conread position: 531-1060
Cow position:
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 270

Conread position: 531-1060
Cow position:
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 333

Conread position: 531-1060
Cow position:
Alignm length: 544
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 531-1060
Cow position:
Alignm length: 541
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 151

Conread position: 531-1060
Cow position:
Alignm length: 544
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 472

Conread position: 531-1060
Cow position:
Alignm length: 545
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 82

Conread position: 531-1060
Cow position:
Alignm length: 553
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 134

Conread position: 531-1060
Cow position:
Alignm length: 541
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 503

Conread position: 531-1060
Cow position:
Alignm length: 546
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 224

Conread position: 531-1060
Cow position:
Alignm length: 548
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 74

Conread position: 531-1063
Cow position:
Alignm length: 556
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 90

Conread position: 531-1064
Cow position:
Alignm length: 540
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 464

Conread position: 531-1064
Cow position:
Alignm length: 548
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 531-1066
Cow position:
Alignm length: 548
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 340

Conread position: 532-842
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 532-996
Cow position:
Alignm length: 473
Alignm identity: 299
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 115

Conread position: 533-910
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 109

Conread position: 533-1021
Cow position:
Alignm length: 503
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 10

Conread position: 534-856
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 48

Conread position: 534-1023
Cow position:
Alignm length: 495
Alignm identity: 303
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 27

Conread position: 534-1058
Cow position:
Alignm length: 535
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 534-1060
Cow position:
Alignm length: 540
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 534-1060
Cow position:
Alignm length: 536
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 36

Conread position: 534-1060
Cow position:
Alignm length: 550
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 134

Conread position: 534-1065
Cow position:
Alignm length: 556
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 106

Conread position: 535-1060
Cow position:
Alignm length: 552
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 114

Conread position: 538-1060
Cow position:
Alignm length: 529
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 23

Conread position: 541-864
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 129

Conread position: 542-899
Cow position:
Alignm length: 359
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 78

Conread position: 542-1058
Cow position:
Alignm length: 536
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 102

Conread position: 543-1060
Cow position:
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 545-1065
Cow position:
Alignm length: 537
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 78

Conread position: 548-820
Cow position:
Alignm length: 275
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 27

Conread position: 555-1057
Cow position:
Alignm length: 510
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 475

Conread position: 562-1060
Cow position:
Alignm length: 516
Alignm identity: 330
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 138

Conread position: 566-1053
Cow position:
Alignm length: 498
Alignm identity: 309
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 108, 131

Conread position: 567-973
Cow position:
Alignm length: 417
Alignm identity: 268
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 44

Conread position: 582-1060
Cow position:
Alignm length: 486
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 586-1058
Cow position:
Alignm length: 490
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 24

Conread position: 589-903
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 623-945
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 645-956
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 305, 8

Conread position: 659-1056
Cow position:
Alignm length: 413
Alignm identity: 285
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 27

Conread position: 664-1019
Cow position:
Alignm length: 363
Alignm identity: 231
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 108

Conread position: 711-944
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 207, 87

Conread position: 711-1000
Cow position:
Alignm length: 291
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 238, 107

Conread position: 712-1060
Cow position:
Alignm length: 370
Alignm identity: 251
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 157, 7

Conread position: 723-1018
Cow position:
Alignm length: 303
Alignm identity: 198
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 124, 11

Conread position: 723-1058
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 44

Conread position: 726-1068
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 224, 65

Conread position: 727-1058
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 224, 26

Conread position: 743-1064
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 207, 7

Conread position: 746-1065
Cow position:
Alignm length: 334
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 160, 0

Conread position: 770-1060
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 144, 34

Conread position: 799-1068
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 152, 25

Conread position: 811-1062
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 815-1058
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 136, 48

Conread position: 829-1060
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 87, 112

Conread position: 859-1060
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 108

Conread position: 874-1064
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 0

Show alignments to all cow chromosomes.