Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-223 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 70 |
| Conread position: | 1-269 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-270 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 90, 117 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 124 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 127, 52 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 81, 117 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 202 |
| Conread position: | 14-271 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 30-271 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 531-694 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-821 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 531-858 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 531-978 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 140, 12 |
| Conread position: | 531-987 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 312 |
| Conread position: | 531-1002 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 284 |
| Conread position: | 531-1053 |
| Cow position: | |
| Alignm length: | 532 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 531-1057 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 542 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 107 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 185 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 542 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 503 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 319 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 30 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 543 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 556 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 518 |
| Conread position: | 533-1060 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 534-1060 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 214 |
| Conread position: | 542-1056 |
| Cow position: | |
| Alignm length: | 524 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 544-1055 |
| Cow position: | |
| Alignm length: | 530 |
| Alignm identity: | 346 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 545-1060 |
| Cow position: | |
| Alignm length: | 534 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 226 |
| Conread position: | 559-1000 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 582-775 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 671-1060 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 133 |
| Conread position: | 674-1060 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 278 |
| Conread position: | 698-1004 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 251, 146 |
| Conread position: | 721-987 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 126, 70 |
| Conread position: | 735-1060 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 208, 88 |
| Conread position: | 738-1015 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 213, 22 |
| Conread position: | 744-1024 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 147, 46 |
| Conread position: | 790-1001 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 135, 85 |
| Conread position: | 836-1060 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 131 |
| Conread position: | 842-1060 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 867-1060 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 888-1067 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 19 |
Show alignments to all cow chromosomes.