Cow genome map

Conread name: Ss1.1-Tra1-TCH01F020058.5

Conread position: 1-223
Cow position: chr26:8919281-8919511 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 70

Conread position: 1-269
Cow position: chr26:18852651-18852931 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 104, 0

Conread position: 1-270
Cow position: chr26:2199057-2199338 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 86, 0

Conread position: 1-271
Cow position: chr26:2351930-2351649 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 92, 22

Conread position: 1-271
Cow position: chr26:3030397-3030115 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 90, 110

Conread position: 1-271
Cow position: chr26:4333866-4333585 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 1-271
Cow position: chr26:4806130-4805848 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 90, 117

Conread position: 1-271
Cow position: chr26:6849002-6848728 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 124

Conread position: 1-271
Cow position: chr26:8870313-8870588 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 28

Conread position: 1-271
Cow position: chr26:9562919-9562639 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 1-271
Cow position: chr26:9844458-9844188 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 127, 52

Conread position: 1-271
Cow position: chr26:12588134-12587852 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 1-271
Cow position: chr26:15144329-15144047 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 90, 0

Conread position: 1-271
Cow position: chr26:19351076-19350799 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 110

Conread position: 1-271
Cow position: chr26:30588935-30588653 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 81, 117

Conread position: 1-271
Cow position: chr26:30783174-30783456 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 202

Conread position: 14-271
Cow position: chr26:21826235-21825967 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 30-271
Cow position: chr26:17396453-17396199 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 45, 81

Conread position: 531-694
Cow position: chr26:9562650-9562484 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 531-821
Cow position: chr26:5675834-5676125 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 101

Conread position: 531-858
Cow position: chr26:4333596-4333268 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 57

Conread position: 531-978
Cow position: chr26:2274807-2274368 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 276
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 12

Conread position: 531-987
Cow position: chr26:8870577-8871037 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 312

Conread position: 531-1002
Cow position: chr26:4604480-4604001 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 284

Conread position: 531-1053
Cow position: chr26:8614511-8613998 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 325
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 56

Conread position: 531-1057
Cow position: chr26:15144058-15143523 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 106

Conread position: 531-1060
Cow position: chr26:2199328-2199873 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 531-1060
Cow position: chr26:2351660-2351116 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 134

Conread position: 531-1060
Cow position: chr26:3030126-3029606 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 107

Conread position: 531-1060
Cow position: chr26:6848739-6848202 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 185

Conread position: 531-1060
Cow position: chr26:8919535-8920073 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 68

Conread position: 531-1060
Cow position: chr26:12587863-12587320 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 88

Conread position: 531-1060
Cow position: chr26:17396210-17395671 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 531-1060
Cow position: chr26:18852922-18853461 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 503

Conread position: 531-1060
Cow position: chr26:19350810-19350280 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 319

Conread position: 531-1060
Cow position: chr26:21825978-21825445 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 30

Conread position: 531-1060
Cow position: chr26:30588664-30588127 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 106

Conread position: 531-1060
Cow position: chr26:30783445-30783999 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 518

Conread position: 533-1060
Cow position: chr26:9844197-9843662 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 534-1060
Cow position: chr26:14894649-14895182 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 214

Conread position: 542-1056
Cow position: chr26:21710254-21709738 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 313
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 49

Conread position: 544-1055
Cow position: chr26:1626714-1627221 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 346
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 69

Conread position: 545-1060
Cow position: chr26:1087735-1087203 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 226

Conread position: 559-1000
Cow position: chr26:26270486-26270934 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 281
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 42

Conread position: 582-775
Cow position: chr26:33524001-33524192 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 62

Conread position: 671-1060
Cow position: chr26:11031012-11031387 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 133

Conread position: 674-1060
Cow position: chr26:9561931-9561551 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 278

Conread position: 698-1004
Cow position: chr26:14507687-14507393 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 251, 146

Conread position: 721-987
Cow position: chr26:3864663-3864395 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 126, 70

Conread position: 735-1060
Cow position: chr26:20264603-20264916 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 208, 88

Conread position: 738-1015
Cow position: chr26:8863358-8863083 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 213, 22

Conread position: 744-1024
Cow position: chr26:32051852-32052128 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 147, 46

Conread position: 790-1001
Cow position: chr26:6806121-6805911 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 135, 85

Conread position: 836-1060
Cow position: chr26:17325081-17325309 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 131

Conread position: 842-1060
Cow position: chr26:5676124-5676347 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 109, 0

Conread position: 867-1060
Cow position: chr26:8086207-8086409 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 135

Conread position: 888-1067
Cow position: chr26:4328388-4328198 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 19

Show alignments to all cow chromosomes.