Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-202 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 77, 191 |
| Conread position: | 1-227 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-241 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 230 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 108 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 108 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 122 |
| Conread position: | 1-272 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 3-269 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 5-271 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 177 |
| Conread position: | 36-269 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 52, 156 |
| Conread position: | 146-271 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 525-998 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 156 |
| Conread position: | 529-1054 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 531-712 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-735 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 159 |
| Conread position: | 531-794 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 531-809 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 531-863 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 531-888 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 531-936 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 186 |
| Conread position: | 531-1003 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 531-1016 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 531-1041 |
| Cow position: | |
| Alignm length: | 522 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1059 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 534 |
| Conread position: | 531-1059 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 229 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 545 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 140 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 543 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 226 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 547 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 228 |
| Conread position: | 531-1060 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 316 |
| Conread position: | 533-801 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 533-819 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 534-933 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 534-1043 |
| Cow position: | |
| Alignm length: | 521 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 224 |
| Conread position: | 554-1065 |
| Cow position: | |
| Alignm length: | 533 |
| Alignm identity: | 349 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 222, 110 |
| Conread position: | 575-851 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 575-1060 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 605-933 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 111 |
| Conread position: | 634-866 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 640-987 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 640-1039 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 35, 223 |
| Conread position: | 646-907 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 671-1060 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 88 |
| Conread position: | 728-1038 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 734-1060 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 189, 16 |
| Conread position: | 799-1060 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 834-1063 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 93 |
| Conread position: | 836-1067 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 185, 71 |
| Conread position: | 858-1058 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 190 |
| Conread position: | 872-1060 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 934-1064 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 118 |
Show alignments to all cow chromosomes.