Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-170 |
| Cow position: | chr28:485150-484971 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-182 |
| Cow position: | chr28:8720879-8720689 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 87, 117 |
| Conread position: | 1-184 |
| Cow position: | chr28:3020331-3020142 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 1-212 |
| Cow position: | chr28:2084011-2084229 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 196 |
| Conread position: | 1-239 |
| Cow position: | chr28:10581566-10581317 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 1-244 |
| Cow position: | chr28:17388902-17389156 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 1-248 |
| Cow position: | chr28:34594397-34594656 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-261 |
| Cow position: | chr28:26425832-26425560 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-266 |
| Cow position: | chr28:782812-783087 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 1-266 |
| Cow position: | chr28:10071701-10071964 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 155 |
| Conread position: | 1-268 |
| Cow position: | chr28:5798164-5798437 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 1-269 |
| Cow position: | chr28:12409809-12409532 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-269 |
| Cow position: | chr28:22232987-22232710 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 92, 238 |
| Conread position: | 1-269 |
| Cow position: | chr28:24589264-24589546 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 1-270 |
| Cow position: | chr28:5751286-5751009 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 1-270 |
| Cow position: | chr28:14750958-14751236 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 1-271 |
| Cow position: | chr28:1167463-1167181 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr28:1505284-1505567 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr28:1814448-1814168 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 1-271 |
| Cow position: | chr28:1953542-1953826 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr28:2724510-2724228 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 124 |
| Conread position: | 1-271 |
| Cow position: | chr28:2988824-2988542 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 92, 119 |
| Conread position: | 1-271 |
| Cow position: | chr28:3191829-3191555 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 1-271 |
| Cow position: | chr28:5113879-5113600 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr28:5566564-5566850 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 123 |
| Conread position: | 1-271 |
| Cow position: | chr28:5937895-5938180 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 1-271 |
| Cow position: | chr28:6538849-6538568 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 92, 110 |
| Conread position: | 1-271 |
| Cow position: | chr28:6779924-6779643 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 198 |
| Conread position: | 1-271 |
| Cow position: | chr28:7002409-7002692 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 1-271 |
| Cow position: | chr28:7740898-7741167 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 74, 163 |
| Conread position: | 1-271 |
| Cow position: | chr28:7789534-7789251 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr28:7822670-7822952 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 1-271 |
| Cow position: | chr28:10497596-10497325 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 1-271 |
| Cow position: | chr28:12150722-12151001 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr28:13460388-13460669 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-271 |
| Cow position: | chr28:17666879-17666606 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 1-271 |
| Cow position: | chr28:18520027-18519749 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 1-271 |
| Cow position: | chr28:22260732-22260456 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr28:32791961-32791679 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 112 |
| Conread position: | 1-271 |
| Cow position: | chr28:33252731-33252999 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 3-263 |
| Cow position: | chr28:5813430-5813702 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 8-271 |
| Cow position: | chr28:1386978-1386705 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 8-271 |
| Cow position: | chr28:5765184-5765449 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 67, 118 |
| Conread position: | 17-271 |
| Cow position: | chr28:8379268-8379533 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 58, 63 |
| Conread position: | 46-271 |
| Cow position: | chr28:21359939-21360176 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 77-271 |
| Cow position: | chr28:14704893-14704692 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 529-1019 |
| Cow position: | chr28:8720269-8719769 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 161 |
| Conread position: | 529-1060 |
| Cow position: | chr28:5814072-5814580 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 531-681 |
| Cow position: | chr28:28473333-28473486 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-704 |
| Cow position: | chr28:2988553-2988375 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 531-708 |
| Cow position: | chr28:14195004-14194825 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 531-816 |
| Cow position: | chr28:7789262-7788977 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 194 |
| Conread position: | 531-820 |
| Cow position: | chr28:17389167-17389459 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 531-860 |
| Cow position: | chr28:25169389-25169065 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 148 |
| Conread position: | 531-941 |
| Cow position: | chr28:2724239-2723826 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 283 |
| Conread position: | 531-1009 |
| Cow position: | chr28:3020033-3019538 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 478 |
| Conread position: | 531-1043 |
| Cow position: | chr28:5113611-5113091 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 531-1056 |
| Cow position: | chr28:10646715-10646206 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 531-1058 |
| Cow position: | chr28:24668305-24668831 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 232 |
| Conread position: | 531-1060 |
| Cow position: | chr28:1167192-1166656 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 285 |
| Conread position: | 531-1060 |
| Cow position: | chr28:1386716-1386174 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 203 |
| Conread position: | 531-1060 |
| Cow position: | chr28:1505556-1506090 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 216 |
| Conread position: | 531-1060 |
| Cow position: | chr28:1814179-1813642 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr28:5566839-5567360 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 407 |
| Conread position: | 531-1060 |
| Cow position: | chr28:5938169-5938707 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr28:6538579-6538041 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 267 |
| Conread position: | 531-1060 |
| Cow position: | chr28:7002681-7003219 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 531-1060 |
| Cow position: | chr28:9268557-9269073 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 531-1060 |
| Cow position: | chr28:10071960-10072496 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 531-1060 |
| Cow position: | chr28:12150990-12151530 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 276 |
| Conread position: | 531-1060 |
| Cow position: | chr28:12409541-12409012 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 226 |
| Conread position: | 531-1060 |
| Cow position: | chr28:13460658-13461199 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 506 |
| Conread position: | 531-1060 |
| Cow position: | chr28:14704703-14704164 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr28:14751226-14751767 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr28:15035412-15034900 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 531-1060 |
| Cow position: | chr28:18519760-18519228 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 531-1060 |
| Cow position: | chr28:21360165-21360715 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 221 |
| Conread position: | 531-1060 |
| Cow position: | chr28:24589537-24590080 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 531-1060 |
| Cow position: | chr28:29820690-29821219 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 531-1060 |
| Cow position: | chr28:33252988-33253529 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 475 |
| Conread position: | 531-1064 |
| Cow position: | chr28:32791690-32791154 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 140 |
| Conread position: | 531-1065 |
| Cow position: | chr28:5802718-5803268 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 531-1066 |
| Cow position: | chr28:3191566-3191025 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 531-1067 |
| Cow position: | chr28:17666617-17666074 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 533-731 |
| Cow position: | chr28:11490816-11490620 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 533-792 |
| Cow position: | chr28:6655845-6655589 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 186, 25 |
| Conread position: | 533-1060 |
| Cow position: | chr28:26425563-26425031 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 5 |
| Conread position: | 534-1058 |
| Cow position: | chr28:22260464-22259930 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 535-746 |
| Cow position: | chr28:9420543-9420328 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 535-905 |
| Cow position: | chr28:6779650-6779276 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 535-1060 |
| Cow position: | chr28:783365-783880 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 536-1001 |
| Cow position: | chr28:12180379-12179919 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 536-1060 |
| Cow position: | chr28:5765443-5765955 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 77 |
| Conread position: | 546-1060 |
| Cow position: | chr28:5750998-5750484 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 124 |
| Conread position: | 548-1057 |
| Cow position: | chr28:7811169-7811658 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 64 |
| Conread position: | 553-1021 |
| Cow position: | chr28:27958965-27958512 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 403, 19 |
| Conread position: | 555-868 |
| Cow position: | chr28:7823253-7823566 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 134 |
| Conread position: | 556-987 |
| Cow position: | chr28:22064669-22064249 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 115, 49 |
| Conread position: | 558-1006 |
| Cow position: | chr28:10872896-10873366 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 112, 100 |
| Conread position: | 559-802 |
| Cow position: | chr28:18100507-18100247 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 563-1060 |
| Cow position: | chr28:10581369-10580866 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 208 |
| Conread position: | 574-1060 |
| Cow position: | chr28:8379787-8380287 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 157 |
| Conread position: | 593-1059 |
| Cow position: | chr28:24884228-24883763 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 402 |
| Conread position: | 598-903 |
| Cow position: | chr28:22232667-22232360 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 212 |
| Conread position: | 607-1068 |
| Cow position: | chr28:29761165-29760697 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 104 |
| Conread position: | 612-868 |
| Cow position: | chr28:32329755-32329496 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 620-1060 |
| Cow position: | chr28:6231995-6231549 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 634-1060 |
| Cow position: | chr28:15586878-15587311 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 645-1060 |
| Cow position: | chr28:9179428-9179836 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 197 |
| Conread position: | 650-860 |
| Cow position: | chr28:2085309-2085517 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 115 |
| Conread position: | 652-1043 |
| Cow position: | chr28:1217343-1216947 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 15 |
| Conread position: | 667-1065 |
| Cow position: | chr28:7741273-7741671 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 672-1021 |
| Cow position: | chr28:15684066-15684424 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 689-1004 |
| Cow position: | chr28:2429128-2429435 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 137 |
| Conread position: | 689-1058 |
| Cow position: | chr28:10460757-10460388 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 698-1060 |
| Cow position: | chr28:484738-484372 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 43 |
| Conread position: | 707-1022 |
| Cow position: | chr28:13603967-13603653 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 96, 200 |
| Conread position: | 715-1057 |
| Cow position: | chr28:5799169-5799513 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 236 |
| Conread position: | 721-1060 |
| Cow position: | chr28:14233060-14232709 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 85, 47 |
| Conread position: | 729-1066 |
| Cow position: | chr28:2988197-2987857 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 187 |
| Conread position: | 735-948 |
| Cow position: | chr28:11490570-11490363 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 15 |
| Conread position: | 735-1068 |
| Cow position: | chr28:18146837-18146505 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 216, 149 |
| Conread position: | 736-1060 |
| Cow position: | chr28:28439709-28440035 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 215, 126 |
| Conread position: | 740-1060 |
| Cow position: | chr28:14194628-14194315 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 211, 46 |
| Conread position: | 763-1053 |
| Cow position: | chr28:27678471-27678759 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 188, 20 |
| Conread position: | 785-1060 |
| Cow position: | chr28:1954296-1954577 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 791-1060 |
| Cow position: | chr28:22042327-22042064 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 159, 199 |
| Conread position: | 799-1060 |
| Cow position: | chr28:10470464-10470728 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 812-1060 |
| Cow position: | chr28:6457354-6457113 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 140, 95 |
| Conread position: | 812-1060 |
| Cow position: | chr28:7788924-7788675 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 818-1057 |
| Cow position: | chr28:10496558-10496312 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 842-1064 |
| Cow position: | chr28:7027258-7027030 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 858-1060 |
| Cow position: | chr28:7826996-7827209 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 194 |
| Conread position: | 892-1060 |
| Cow position: | chr28:22232225-22232055 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 15 |
Show alignments to all cow chromosomes.