Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020058.5 |
| Conread position: | 1-132 |
| Cow position: | chr29:410141-410007 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 119 |
| Conread position: | 1-185 |
| Cow position: | chr29:16110793-16110987 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-223 |
| Cow position: | chr29:35297248-35297480 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-248 |
| Cow position: | chr29:42802510-42802769 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 203 |
| Conread position: | 1-262 |
| Cow position: | chr29:7844709-7844982 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-266 |
| Cow position: | chr29:13582446-13582716 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 179 |
| Conread position: | 1-268 |
| Cow position: | chr29:21426645-21426363 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-268 |
| Cow position: | chr29:25932158-25931880 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-269 |
| Cow position: | chr29:2690285-2690565 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-269 |
| Cow position: | chr29:40502599-40502319 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-270 |
| Cow position: | chr29:2100230-2100511 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-270 |
| Cow position: | chr29:7856888-7857162 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 1-270 |
| Cow position: | chr29:16022915-16023198 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-271 |
| Cow position: | chr29:48088-47807 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:251152-251438 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-271 |
| Cow position: | chr29:610234-609955 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 1-271 |
| Cow position: | chr29:5957984-5958263 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 149 |
| Conread position: | 1-271 |
| Cow position: | chr29:5982333-5982051 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-271 |
| Cow position: | chr29:7430834-7430557 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:9643375-9643101 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 92, 182 |
| Conread position: | 1-271 |
| Cow position: | chr29:10823584-10823313 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 74, 109 |
| Conread position: | 1-271 |
| Cow position: | chr29:14085750-14085468 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-271 |
| Cow position: | chr29:14586300-14586583 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:15894472-15894190 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:15968483-15968201 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:18856565-18856284 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-271 |
| Cow position: | chr29:19622863-19622582 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:19885448-19885727 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 1-271 |
| Cow position: | chr29:20251543-20251825 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-271 |
| Cow position: | chr29:26164438-26164166 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 73, 124 |
| Conread position: | 1-271 |
| Cow position: | chr29:27249965-27249683 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:27980544-27980265 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:32540193-32540470 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-271 |
| Cow position: | chr29:34799425-34799144 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 172 |
| Conread position: | 1-271 |
| Cow position: | chr29:34925857-34926138 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 92, 116 |
| Conread position: | 1-271 |
| Cow position: | chr29:38227364-38227639 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 124 |
| Conread position: | 1-271 |
| Cow position: | chr29:39079326-39079045 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 1-271 |
| Cow position: | chr29:45460099-45460382 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 118 |
| Conread position: | 1-271 |
| Cow position: | chr29:45586983-45586701 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-272 |
| Cow position: | chr29:669679-669397 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 90, 109 |
| Conread position: | 1-272 |
| Cow position: | chr29:10647866-10647588 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 2-271 |
| Cow position: | chr29:43322939-43323220 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 73, 109 |
| Conread position: | 4-184 |
| Cow position: | chr29:2950877-2950695 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 8-268 |
| Cow position: | chr29:23976227-23976498 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 68, 54 |
| Conread position: | 8-269 |
| Cow position: | chr29:2840985-2840719 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 67, 103 |
| Conread position: | 9-271 |
| Cow position: | chr29:105427-105696 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 15-271 |
| Cow position: | chr29:31181797-31182064 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 103 |
| Conread position: | 16-262 |
| Cow position: | chr29:9961680-9961940 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 54-271 |
| Cow position: | chr29:32559324-32559094 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 120-264 |
| Cow position: | chr29:16173820-16173674 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 528-1066 |
| Cow position: | chr29:2100498-2101044 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 529-1060 |
| Cow position: | chr29:21238723-21238208 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 143, 33 |
| Conread position: | 529-1060 |
| Cow position: | chr29:32804087-32804607 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 124 |
| Conread position: | 529-1060 |
| Cow position: | chr29:34873476-34874003 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 529-1064 |
| Cow position: | chr29:26164181-26163644 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 241 |
| Conread position: | 531-709 |
| Cow position: | chr29:38654998-38654816 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-787 |
| Cow position: | chr29:16023188-16023448 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-820 |
| Cow position: | chr29:27249694-27249401 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 531-851 |
| Cow position: | chr29:2690556-2690885 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-860 |
| Cow position: | chr29:14216618-14216948 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 233 |
| Conread position: | 531-868 |
| Cow position: | chr29:15894201-15893859 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-899 |
| Cow position: | chr29:34926127-34926499 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 531-948 |
| Cow position: | chr29:16344889-16345310 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-949 |
| Cow position: | chr29:2840728-2840303 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-966 |
| Cow position: | chr29:15968212-15967773 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 379 |
| Conread position: | 531-994 |
| Cow position: | chr29:9643112-9642640 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 423 |
| Conread position: | 531-1006 |
| Cow position: | chr29:21426371-21425896 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 531-1016 |
| Cow position: | chr29:31024130-31023657 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 317 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 531-1019 |
| Cow position: | chr29:45460371-45460874 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 286 |
| Conread position: | 531-1043 |
| Cow position: | chr29:6265625-6265096 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1058 |
| Cow position: | chr29:7430568-7430032 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 531-1058 |
| Cow position: | chr29:40502328-40501797 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 242 |
| Conread position: | 531-1060 |
| Cow position: | chr29:609966-609455 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 531-1060 |
| Cow position: | chr29:669409-668882 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 463 |
| Conread position: | 531-1060 |
| Cow position: | chr29:5958252-5958778 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 531-1060 |
| Cow position: | chr29:8664174-8664696 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 531-1060 |
| Cow position: | chr29:9620072-9620601 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 167 |
| Conread position: | 531-1060 |
| Cow position: | chr29:10823324-10822794 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 271 |
| Conread position: | 531-1060 |
| Cow position: | chr29:14085479-14084941 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 531-1060 |
| Cow position: | chr29:14210918-14210381 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 106 |
| Conread position: | 531-1060 |
| Cow position: | chr29:14586572-14587106 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 531-1060 |
| Cow position: | chr29:16111028-16111574 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 467 |
| Conread position: | 531-1060 |
| Cow position: | chr29:18856295-18855762 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 531-1060 |
| Cow position: | chr29:19885716-19886266 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr29:20251814-20252355 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 531-1060 |
| Cow position: | chr29:27980276-27979737 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 162 |
| Conread position: | 531-1060 |
| Cow position: | chr29:32559105-32558569 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 430 |
| Conread position: | 531-1060 |
| Cow position: | chr29:34799155-34798621 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 231 |
| Conread position: | 531-1060 |
| Cow position: | chr29:35263342-35263845 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 531-1060 |
| Cow position: | chr29:39079056-39078519 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1061 |
| Cow position: | chr29:31182053-31182594 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 344 |
| Conread position: | 531-1064 |
| Cow position: | chr29:10647600-10647057 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 236 |
| Conread position: | 531-1064 |
| Cow position: | chr29:35815326-35814783 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-1064 |
| Cow position: | chr29:38227628-38228170 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 240 |
| Conread position: | 531-1065 |
| Cow position: | chr29:47818-47245 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 411 |
| Conread position: | 531-1068 |
| Cow position: | chr29:2949687-2949172 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 138 |
| Conread position: | 532-1058 |
| Cow position: | chr29:13582730-13583265 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 129 |
| Conread position: | 533-914 |
| Cow position: | chr29:41367034-41366652 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 151 |
| Conread position: | 533-1064 |
| Cow position: | chr29:7845033-7845579 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 280 |
| Conread position: | 534-1060 |
| Cow position: | chr29:25931885-25931342 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 534-1060 |
| Cow position: | chr29:32891459-32891978 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 535-1058 |
| Cow position: | chr29:5982058-5981523 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 535-1064 |
| Cow position: | chr29:23976776-23977315 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 234 |
| Conread position: | 536-1060 |
| Cow position: | chr29:43323214-43323746 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 238 |
| Conread position: | 536-1060 |
| Cow position: | chr29:45586707-45586193 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 537-746 |
| Cow position: | chr29:2748596-2748383 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 147 |
| Conread position: | 543-911 |
| Cow position: | chr29:34585043-34585402 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 543-915 |
| Cow position: | chr29:4633741-4633367 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 14, 158 |
| Conread position: | 544-860 |
| Cow position: | chr29:16173657-16173360 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 289, 61 |
| Conread position: | 558-831 |
| Cow position: | chr29:15948847-15948570 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 114, 200 |
| Conread position: | 558-1060 |
| Cow position: | chr29:6213202-6213709 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 250 |
| Conread position: | 558-1060 |
| Cow position: | chr29:32286881-32287368 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 562-1060 |
| Cow position: | chr29:32540778-32541283 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 189 |
| Conread position: | 566-1059 |
| Cow position: | chr29:37164828-37165319 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 566-1060 |
| Cow position: | chr29:39368575-39369050 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 455, 49 |
| Conread position: | 567-1060 |
| Cow position: | chr29:42803106-42803599 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 50 |
| Conread position: | 591-1060 |
| Cow position: | chr29:31096669-31096194 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 244 |
| Conread position: | 597-1031 |
| Cow position: | chr29:646518-646947 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 601-1060 |
| Cow position: | chr29:19622560-19622094 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 606-1021 |
| Cow position: | chr29:21264672-21265075 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 94 |
| Conread position: | 614-868 |
| Cow position: | chr29:15998105-15997852 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 95 |
| Conread position: | 618-929 |
| Cow position: | chr29:30259844-30259535 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 635-1035 |
| Cow position: | chr29:43408863-43408466 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 637-1055 |
| Cow position: | chr29:8774548-8774133 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 654-1058 |
| Cow position: | chr29:19654409-19654813 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 671-1060 |
| Cow position: | chr29:45205296-45205687 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 205 |
| Conread position: | 674-1060 |
| Cow position: | chr29:35297628-35298005 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 233 |
| Conread position: | 703-1058 |
| Cow position: | chr29:38237699-38237332 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 714-1011 |
| Cow position: | chr29:43791259-43791558 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 236, 0 |
| Conread position: | 721-1000 |
| Cow position: | chr29:13920770-13920489 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 721-1060 |
| Cow position: | chr29:15997822-15997466 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 187, 33 |
| Conread position: | 723-1060 |
| Cow position: | chr29:801547-801212 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 51, 199 |
| Conread position: | 728-1060 |
| Cow position: | chr29:14448759-14449084 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 223, 13 |
| Conread position: | 736-1060 |
| Cow position: | chr29:13650916-13651238 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 14 |
| Conread position: | 736-1066 |
| Cow position: | chr29:2747573-2747245 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 149 |
| Conread position: | 746-1060 |
| Cow position: | chr29:27263026-27262711 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 54 |
| Conread position: | 756-1016 |
| Cow position: | chr29:8061247-8060987 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 764-1055 |
| Cow position: | chr29:15946933-15946647 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 95 |
| Conread position: | 812-1060 |
| Cow position: | chr29:2465933-2465667 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 815-1060 |
| Cow position: | chr29:16023507-16023758 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 818-1060 |
| Cow position: | chr29:13622906-13622669 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 173 |
| Conread position: | 858-1060 |
| Cow position: | chr29:42939219-42939009 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 858-1065 |
| Cow position: | chr29:34754205-34754411 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 892-1060 |
| Cow position: | chr29:3328347-3328522 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 139 |
Show alignments to all cow chromosomes.