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Cow genome map

           
Conread name:
           
Ss1.1-Tra1-TCH01F020058.5
        

               
Conread position:
               
1-202
               

               
Cow position:
               
chr6:8202080-8202291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr6:2887524-2887742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr6:55543982-55543764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr6:25794112-25794335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr6:14852240-14852003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr6:6566950-6567186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr6:58027096-58027346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr6:40813328-40813057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr6:28063673-28063946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:65928307-65928580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:15280212-15279942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:26670530-26670254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr6:8760961-8760682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr6:15140840-15140565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr6:51086283-51086562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr6:331129-330848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr6:3889141-3888864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr6:7178937-7178654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 152
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr6:24239398-24239675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 195
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr6:43618052-43618333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr6:44032129-44032410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
92, 124
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:185445-185164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:1411606-1411324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:1822290-1822008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:2375038-2375320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:5949437-5949155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:7141126-7140843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:10499387-10499105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:11724767-11724488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:12665976-12665700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:13104395-13104676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:13317165-13316886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
54, 255
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:13847362-13847645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
33, 192
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:13944244-13944526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:16052216-16052499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:17046397-17046679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:21972995-21973275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:24323044-24322762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:27470941-27471221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 197
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:28105511-28105235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:29311835-29312117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:30274835-30274558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:30479447-30479725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
92, 184
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:34892662-34892381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:35876372-35876094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:36526392-36526671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
74, 221
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:38233177-38233452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:39437890-39438165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:39908864-39909146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:40251998-40252280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:40275425-40275707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:40315727-40316004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:43793373-43793090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:47042855-47042579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:52693367-52693647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:65821789-65821506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 218
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:65914536-65914817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:69221873-69221591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr6:27169918-27170197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
81, 250
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr6:40867218-40866867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1-1060
               

               
Cow position:
               
chr6:3149340-3150409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1072
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
618, 880
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr6:44150218-44149937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr6:58600825-58601100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
126, 206
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr6:11274572-11274308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr6:3488079-3487803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr6:3277605-3277340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr6:38900823-38900549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr6:66232160-66232432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
82, 244
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr6:20560762-20560487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
67, 103
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr6:27529657-27529386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 246
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr6:59918725-59918452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr6:65841936-65842202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 99
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chr6:68027137-68027407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
18-238
               

               
Cow position:
               
chr6:10500654-10500885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
18-271
               

               
Cow position:
               
chr6:17597936-17597672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
24-271
               

               
Cow position:
               
chr6:186109-185850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 94
               

               
Conread position:
               
29-271
               

               
Cow position:
               
chr6:28275353-28275602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
44-271
               

               
Cow position:
               
chr6:6475486-6475249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
51-271
               

               
Cow position:
               
chr6:51714091-51714319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 132
               

               
Conread position:
               
55-271
               

               
Cow position:
               
chr6:914027-914254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
64-271
               

               
Cow position:
               
chr6:40326281-40326064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
95-271
               

               
Cow position:
               
chr6:702348-702532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
115-271
               

               
Cow position:
               
chr6:43999522-43999680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
129-271
               

               
Cow position:
               
chr6:28491090-28490946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
529-748
               

               
Cow position:
               
chr6:11274292-11274068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 206
               

               
Conread position:
               
529-1001
               

               
Cow position:
               
chr6:1099546-1099080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
529-1021
               

               
Cow position:
               
chr6:44905098-44905583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
529-1058
               

               
Cow position:
               
chr6:12530095-12530615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
529-1059
               

               
Cow position:
               
chr6:1822023-1821468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
529-1060
               

               
Cow position:
               
chr6:28105249-28104714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
530-1000
               

               
Cow position:
               
chr6:33899625-33899167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
531-680
               

               
Cow position:
               
chr6:33340-33493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
531-680
               

               
Cow position:
               
chr6:10499116-10498963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
531-680
               

               
Cow position:
               
chr6:24322773-24322620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
531-680
               

               
Cow position:
               
chr6:69221602-69221449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
531-738
               

               
Cow position:
               
chr6:65914806-65915011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
531-744
               

               
Cow position:
               
chr6:40326075-40325858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
531-767
               

               
Cow position:
               
chr6:26045446-26045687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 169
               

               
Conread position:
               
531-859
               

               
Cow position:
               
chr6:27332365-27332690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
531-904
               

               
Cow position:
               
chr6:7140854-7140479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 192
               

               
Conread position:
               
531-906
               

               
Cow position:
               
chr6:185861-185482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
531-911
               

               
Cow position:
               
chr6:16052488-16052871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
531-913
               

               
Cow position:
               
chr6:40315993-40316381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
531-958
               

               
Cow position:
               
chr6:30479714-30480141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
531-983
               

               
Cow position:
               
chr6:11724499-11724054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
531-989
               

               
Cow position:
               
chr6:6475260-6474792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
531-1019
               

               
Cow position:
               
chr6:185175-184678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 191
               

               
Conread position:
               
531-1020
               

               
Cow position:
               
chr6:13847634-13848127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
531-1024
               

               
Cow position:
               
chr6:65941217-65940717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 405
               

               
Conread position:
               
531-1043
               

               
Cow position:
               
chr6:28133548-28134046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
531-1043
               

               
Cow position:
               
chr6:65881820-65882340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
531-1055
               

               
Cow position:
               
chr6:3487814-3487294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
531-1056
               

               
Cow position:
               
chr6:8021504-8022029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 134
               

               
Conread position:
               
531-1056
               

               
Cow position:
               
chr6:25214831-25215346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
531-1056
               

               
Cow position:
               
chr6:44032400-44032930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
531-1058
               

               
Cow position:
               
chr6:17046668-17047197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:330858-330319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:914243-914779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:2375309-2375833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 311
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:3888874-3888360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:5949166-5948637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:8202790-8203323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 499
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:8760691-8760149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:12665711-12665172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:13104665-13105206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 298
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:13944515-13945055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 246
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:20560498-20559957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 384
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:24239665-24240198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 295
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:26670258-26669719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 382
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:27170185-27170725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:27471210-27471725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:27529397-27528852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 468
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:28490957-28490423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:29312106-29312647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:35876105-35875566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:40275696-40276232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 320
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:43618323-43618867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:43999669-44000207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 279
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:44149948-44149411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:47042590-47042071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:55542645-55542118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 216
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:66232421-66232954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 365
               

               
Conread position:
               
531-1060
               

               
Cow position:
               
chr6:68027529-68028061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 468
               

               
Conread position:
               
531-1063
               

               
Cow position:
               
chr6:1382685-1382171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
531-1064
               

               
Cow position:
               
chr6:58601089-58601632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
531-1065
               

               
Cow position:
               
chr6:538598-539122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
531-1067
               

               
Cow position:
               
chr6:51086553-51087095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
531-1068
               

               
Cow position:
               
chr6:16634850-16635400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
531-1068
               

               
Cow position:
               
chr6:38271509-38272036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
531-1068
               

               
Cow position:
               
chr6:50634579-50635109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 30
               

               
Conread position:
               
532-982
               

               
Cow position:
               
chr6:59918462-59918006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
533-868
               

               
Cow position:
               
chr6:15021820-15022156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
533-916
               

               
Cow position:
               
chr6:40252271-40252655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 318
               

               
Conread position:
               
533-1060
               

               
Cow position:
               
chr6:40553955-40553428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
534-808
               

               
Cow position:
               
chr6:28275594-28275867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
534-1018
               

               
Cow position:
               
chr6:43793098-43792620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
534-1060
               

               
Cow position:
               
chr6:6567199-6567730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 411
               

               
Conread position:
               
534-1060
               

               
Cow position:
               
chr6:15140571-15140031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
534-1060
               

               
Cow position:
               
chr6:21973267-21973816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
534-1060
               

               
Cow position:
               
chr6:32449284-32448764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
535-985
               

               
Cow position:
               
chr6:54179618-54180073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
535-1058
               

               
Cow position:
               
chr6:65821362-65820829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
535-1060
               

               
Cow position:
               
chr6:3276763-3276226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
535-1060
               

               
Cow position:
               
chr6:15279195-15278668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
535-1060
               

               
Cow position:
               
chr6:39438378-39438911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
536-802
               

               
Cow position:
               
chr6:38900555-38900291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
536-962
               

               
Cow position:
               
chr6:56043106-56042675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
536-1060
               

               
Cow position:
               
chr6:40866705-40866178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 290
               

               
Conread position:
               
539-1060
               

               
Cow position:
               
chr6:1411042-1410506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
539-1064
               

               
Cow position:
               
chr6:51730713-51731230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 221
               

               
Conread position:
               
542-1060
               

               
Cow position:
               
chr6:30274273-30273749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 216
               

               
Conread position:
               
544-1062
               

               
Cow position:
               
chr6:13316849-13316323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 142
               

               
Conread position:
               
558-987
               

               
Cow position:
               
chr6:11404172-11404591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
558-1062
               

               
Cow position:
               
chr6:28169541-28170049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 429
               

               
Conread position:
               
563-779
               

               
Cow position:
               
chr6:36526904-36527124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 217
               

               
Conread position:
               
563-1060
               

               
Cow position:
               
chr6:702844-703360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 303
               

               
Conread position:
               
563-1065
               

               
Cow position:
               
chr6:39334227-39333717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
566-851
               

               
Cow position:
               
chr6:67210399-67210681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
265, 32
               

               
Conread position:
               
570-1060
               

               
Cow position:
               
chr6:19337090-19336594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
573-830
               

               
Cow position:
               
chr6:10609558-10609817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
582-1010
               

               
Cow position:
               
chr6:52693678-52694106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 164
               

               
Conread position:
               
583-805
               

               
Cow position:
               
chr6:14389240-14389463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
591-1060
               

               
Cow position:
               
chr6:13310682-13310211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
595-878
               

               
Cow position:
               
chr6:64716665-64716944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
598-1060
               

               
Cow position:
               
chr6:58027352-58027820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 157
               

               
Conread position:
               
603-984
               

               
Cow position:
               
chr6:57408677-57408301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 71
               

               
Conread position:
               
606-1060
               

               
Cow position:
               
chr6:34891439-34890977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
620-986
               

               
Cow position:
               
chr6:31565456-31565090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
624-1060
               

               
Cow position:
               
chr6:51715243-51715673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 130
               

               
Conread position:
               
634-1060
               

               
Cow position:
               
chr6:10644459-10644882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
634-1060
               

               
Cow position:
               
chr6:41190035-41190457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
637-778
               

               
Cow position:
               
chr6:48369825-48369968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
638-1068
               

               
Cow position:
               
chr6:58065451-58065892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
644-1060
               

               
Cow position:
               
chr6:4259022-4258610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
306, 117
               

               
Conread position:
               
652-1060
               

               
Cow position:
               
chr6:1404861-1404440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
659-1056
               

               
Cow position:
               
chr6:34443652-34444064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
662-1060
               

               
Cow position:
               
chr6:17597577-17597162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
664-1067
               

               
Cow position:
               
chr6:65842368-65842768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 213
               

               
Conread position:
               
667-1057
               

               
Cow position:
               
chr6:7834272-7834659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 58
               

               
Conread position:
               
671-1021
               

               
Cow position:
               
chr6:46573856-46573505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
687-907
               

               
Cow position:
               
chr6:25794046-25793826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
690-1060
               

               
Cow position:
               
chr6:39910104-39910480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 340
               

               
Conread position:
               
703-1064
               

               
Cow position:
               
chr6:50646401-50646034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 0
               

               
Conread position:
               
708-945
               

               
Cow position:
               
chr6:33991608-33991378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
715-1060
               

               
Cow position:
               
chr6:18973613-18973271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 206
               

               
Conread position:
               
721-1063
               

               
Cow position:
               
chr6:10339795-10339467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
230, 36
               

               
Conread position:
               
727-1002
               

               
Cow position:
               
chr6:66193713-66193440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
224, 190
               

               
Conread position:
               
735-1021
               

               
Cow position:
               
chr6:44550340-44550061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
213, 25
               

               
Conread position:
               
735-1059
               

               
Cow position:
               
chr6:60931506-60931831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
735-1060
               

               
Cow position:
               
chr6:11871830-11871500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
212, 95
               

               
Conread position:
               
735-1060
               

               
Cow position:
               
chr6:15477977-15478320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
749-1060
               

               
Cow position:
               
chr6:36527130-36527447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 26
               

               
Conread position:
               
749-1067
               

               
Cow position:
               
chr6:44262662-44262324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
752-1060
               

               
Cow position:
               
chr6:21836361-21836043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
165, 146
               

               
Conread position:
               
772-1060
               

               
Cow position:
               
chr6:31636562-31636274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
149, 184
               

               
Conread position:
               
784-1060
               

               
Cow position:
               
chr6:66546358-66546633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
785-1060
               

               
Cow position:
               
chr6:1535712-1535430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
124, 137
               

               
Conread position:
               
789-1060
               

               
Cow position:
               
chr6:40326284-40326561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
213, 241
               

               
Conread position:
               
799-1000
               

               
Cow position:
               
chr6:32073130-32072934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
171, 42
               

               
Conread position:
               
811-1057
               

               
Cow position:
               
chr6:10632447-10632698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
140, 95
               

               
Conread position:
               
812-1058
               

               
Cow position:
               
chr6:50716-50462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
812-1065
               

               
Cow position:
               
chr6:28275900-28276160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
815-1064
               

               
Cow position:
               
chr6:9263987-9264238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
135, 150
               

               
Conread position:
               
842-1060
               

               
Cow position:
               
chr6:45586883-45587094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 148
               

               
Conread position:
               
848-1065
               

               
Cow position:
               
chr6:10250671-10250454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
856-1058
               

               
Cow position:
               
chr6:41228379-41228588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 196
               

               
Conread position:
               
857-1060
               

               
Cow position:
               
chr6:10609823-10610019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
873-1064
               

               
Cow position:
               
chr6:3784720-3784917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
876-1060
               

               
Cow position:
               
chr6:7140375-7140197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
884-1060
               

               
Cow position:
               
chr6:28187853-28187677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
891-1060
               

               
Cow position:
               
chr6:16053077-16053253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 140
               

               
Conread position:
               
892-1060
               

               
Cow position:
               
chr6:48580018-48579842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
909-1021
               

               
Cow position:
               
chr6:41325-41212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 89
               
Show alignments to all cow chromosomes.