Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01F020064.5 |
| Conread position: | 3-618 |
| Cow position: | chr1:63498766-63499388 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 399 |
| Conread position: | 624-1272 |
| Cow position: | chr1:18015561-18014899 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 164 |
| Conread position: | 626-1272 |
| Cow position: | chr1:15023428-15024065 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 77 |
| Conread position: | 761-1265 |
| Cow position: | chr1:59643412-59643914 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 354 |
| Conread position: | 770-1265 |
| Cow position: | chr1:99373569-99374071 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 258 |
| Conread position: | 975-1265 |
| Cow position: | chr1:57653060-57653355 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 976-1255 |
| Cow position: | chr1:80557149-80556862 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 200 |
| Conread position: | 985-1198 |
| Cow position: | chr1:77653916-77654131 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 186 |
| Conread position: | 993-1271 |
| Cow position: | chr1:16581997-16581715 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 995-1256 |
| Cow position: | chr1:29951568-29951306 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 155 |
| Conread position: | 1025-1270 |
| Cow position: | chr1:56630527-56630776 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 1063-1246 |
| Cow position: | chr1:77654185-77654367 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 1096-1265 |
| Cow position: | chr1:82353446-82353612 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 76 |
Show alignments to all cow chromosomes.