Cow genome map


           Conread name:
           Ss1.1-Tra1-TCH01F020064.5
        

               Conread position:
               621-1211
               

               Cow position:
               chr3:49278971-49278388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 70
               

               Conread position:
               974-1248
               

               Cow position:
               chr3:50208215-50208493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 228
               

               Conread position:
               985-1262
               

               Cow position:
               chr3:32627999-32627719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               142, 193
               

               Conread position:
               996-1272
               

               Cow position:
               chr3:12686743-12686470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               1085-1265
               

               Cow position:
               chr3:17939334-17939154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               1089-1265
               

               Cow position:
               chr3:19723604-19723425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.