Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G090098.5 |
| Conread position: | 320-711 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 332-597 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 336-636 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 19 |
| Conread position: | 337-563 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 337-599 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 337-635 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 337-637 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 142, 18 |
| Conread position: | 337-644 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 337-654 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 337-670 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 17 |
| Conread position: | 337-675 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 337-718 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 18 |
| Conread position: | 338-580 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 343-566 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 343-675 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 343-678 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 352-609 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 352-710 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 74 |
| Conread position: | 353-591 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 353-600 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 353-606 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 353-612 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 126, 16 |
| Conread position: | 353-625 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 353-637 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 353-640 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 353-663 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 80 |
| Conread position: | 353-664 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 353-666 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 353-704 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 355-526 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 355-717 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 357-637 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 361-718 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 276, 62 |
| Conread position: | 365-608 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 365-667 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 181 |
| Conread position: | 368-680 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 371-752 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 387-749 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 48 |
| Conread position: | 397-608 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 398-719 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 400-684 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 434-666 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 196 |
| Conread position: | 435-665 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 194 |
| Conread position: | 436-675 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 171 |
| Conread position: | 436-678 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 452-608 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 452-612 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 452-682 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 174 |
| Conread position: | 452-699 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 26, 175 |
| Conread position: | 453-675 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 172 |
| Conread position: | 459-711 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 181, 13 |
| Conread position: | 477-611 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 477-671 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 482-633 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 131, 138 |
| Conread position: | 482-637 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 482-675 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 483-664 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 483-666 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 6, 105 |
| Conread position: | 483-687 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 142 |
| Conread position: | 484-671 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 6 |
| Conread position: | 486-596 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 489-754 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 491-675 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 108, 134 |
| Conread position: | 500-640 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 113 |
| Conread position: | 501-678 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 137, 123 |
| Conread position: | 501-718 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 502-645 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 116 |
| Conread position: | 508-710 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 508-711 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 517-719 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 120, 198 |
Show alignments to all cow chromosomes.