Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G090098.5 |
| Conread position: | 323-678 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 337-566 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 337-574 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 337-601 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 337-680 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 337-706 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 337-718 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 338-644 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 134, 97 |
| Conread position: | 340-625 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 283, 16 |
| Conread position: | 343-584 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 343-607 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 343-608 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 343-666 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 10 |
| Conread position: | 343-690 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 350-675 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 351-711 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 353-579 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 65 |
| Conread position: | 353-579 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 353-718 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 354-611 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 355-606 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 355-657 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 62, 77 |
| Conread position: | 356-666 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 357-632 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 96, 9 |
| Conread position: | 357-716 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 362-710 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 363-590 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 368-635 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 369-669 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 372-661 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 254 |
| Conread position: | 374-661 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 390-644 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 391-673 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 436-723 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 23, 27 |
| Conread position: | 440-654 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 449-611 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 453-682 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 461-599 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 462-589 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 477-666 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 176, 53 |
| Conread position: | 482-636 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 482-639 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 153, 140 |
| Conread position: | 482-666 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 171, 143 |
| Conread position: | 482-668 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 493-666 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 113, 135 |
| Conread position: | 501-678 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 105, 112 |
| Conread position: | 515-720 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 119, 107 |
| Conread position: | 571-722 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
Show alignments to all cow chromosomes.