Cow genome map

Conread name: Ss1.1-Tra1-TCH01G090098.5

Conread position: 323-678
Cow position: chr17:22808455-22808799 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 50, 12

Conread position: 337-566
Cow position: chr17:17939009-17938788 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 337-574
Cow position: chr17:42585777-42585547 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 18

Conread position: 337-601
Cow position: chr17:4187377-4187113 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 91, 16

Conread position: 337-680
Cow position: chr17:41715647-41715315 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 116, 12

Conread position: 337-706
Cow position: chr17:33196203-33196577 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 26, 17

Conread position: 337-718
Cow position: chr17:21850998-21851385 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 16

Conread position: 338-644
Cow position: chr17:33190588-33190262 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 134, 97

Conread position: 340-625
Cow position: chr17:5130-5407 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 283, 16

Conread position: 343-584
Cow position: chr17:1101489-1101255 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 110, 12

Conread position: 343-607
Cow position: chr17:26654812-26654556 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 10

Conread position: 343-608
Cow position: chr17:26652838-26653093 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 15

Conread position: 343-666
Cow position: chr17:33985156-33985467 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 136, 10

Conread position: 343-690
Cow position: chr17:3830053-3829712 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 10

Conread position: 350-675
Cow position: chr17:3836769-3836440 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 75

Conread position: 351-711
Cow position: chr17:25504221-25503867 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 56

Conread position: 353-579
Cow position: chr17:22835425-22835208 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 65

Conread position: 353-579
Cow position: chr17:32155119-32154897 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 38

Conread position: 353-718
Cow position: chr17:35251300-35251658 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 28

Conread position: 354-611
Cow position: chr17:36039027-36038774 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 71

Conread position: 355-606
Cow position: chr17:24827393-24827149 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 14

Conread position: 355-657
Cow position: chr17:24004941-24004655 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 77

Conread position: 356-666
Cow position: chr17:27865560-27865259 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 68

Conread position: 357-632
Cow position: chr17:27593464-27593196 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 9

Conread position: 357-716
Cow position: chr17:9086588-9086235 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 73

Conread position: 362-710
Cow position: chr17:23783604-23783947 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 68

Conread position: 363-590
Cow position: chr17:17298127-17297898 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 60

Conread position: 368-635
Cow position: chr17:22463656-22463910 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 87, 23

Conread position: 369-669
Cow position: chr17:22470049-22470342 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 27

Conread position: 372-661
Cow position: chr17:19004643-19004951 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 254

Conread position: 374-661
Cow position: chr17:21840372-21840075 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 65, 118

Conread position: 390-644
Cow position: chr17:15525427-15525163 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 94

Conread position: 391-673
Cow position: chr17:21898602-21898322 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 62, 39

Conread position: 436-723
Cow position: chr17:3435329-3435045 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 27

Conread position: 440-654
Cow position: chr17:8303786-8303577 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 60

Conread position: 449-611
Cow position: chr17:45883762-45883600 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 13

Conread position: 453-682
Cow position: chr17:16358779-16358547 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 49

Conread position: 461-599
Cow position: chr17:37710832-37710693 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 462-589
Cow position: chr17:16952774-16952900 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 477-666
Cow position: chr17:6202962-6202779 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 176, 53

Conread position: 482-636
Cow position: chr17:24995290-24995444 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 47, 143

Conread position: 482-639
Cow position: chr17:24586277-24586434 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 153, 140

Conread position: 482-666
Cow position: chr17:10639828-10639646 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 143

Conread position: 482-668
Cow position: chr17:1777229-1777049 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 493-666
Cow position: chr17:25545137-25544961 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 113, 135

Conread position: 501-678
Cow position: chr17:4516-4692 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 105, 112

Conread position: 515-720
Cow position: chr17:26656132-26656338 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 119, 107

Conread position: 571-722
Cow position: chr17:23809578-23809728 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 104, 0

Show alignments to all cow chromosomes.