Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G090098.5 |
| Conread position: | 337-609 |
| Cow position: | chr19:43551024-43551297 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 337-638 |
| Cow position: | chr19:28448332-28448032 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 337-718 |
| Cow position: | chr19:26393018-26393405 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 337-722 |
| Cow position: | chr19:11784114-11784497 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 18 |
| Conread position: | 338-588 |
| Cow position: | chr19:6542004-6541757 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 338-719 |
| Cow position: | chr19:44339244-44338874 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 340-666 |
| Cow position: | chr19:15971898-15972215 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 343-619 |
| Cow position: | chr19:11973332-11973602 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 350-675 |
| Cow position: | chr19:11076312-11076638 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 352-601 |
| Cow position: | chr19:16520296-16520548 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 353-592 |
| Cow position: | chr19:9903927-9903685 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 16 |
| Conread position: | 353-598 |
| Cow position: | chr19:21017246-21017004 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 353-599 |
| Cow position: | chr19:33287122-33287363 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 353-671 |
| Cow position: | chr19:7384694-7385004 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 241, 52 |
| Conread position: | 354-566 |
| Cow position: | chr19:14424705-14424911 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 354-666 |
| Cow position: | chr19:53634534-53634227 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 355-572 |
| Cow position: | chr19:20608076-20607866 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 360-567 |
| Cow position: | chr19:37778568-37778364 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 378-607 |
| Cow position: | chr19:28610208-28610426 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 381-666 |
| Cow position: | chr19:11589890-11590168 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 383-639 |
| Cow position: | chr19:51647348-51647599 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 449-720 |
| Cow position: | chr19:25350-25079 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 120 |
| Conread position: | 452-675 |
| Cow position: | chr19:20609677-20609895 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 462-634 |
| Cow position: | chr19:55149912-55149743 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 474-705 |
| Cow position: | chr19:22429088-22428861 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 193, 150 |
| Conread position: | 478-715 |
| Cow position: | chr19:53629804-53630041 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 163, 66 |
| Conread position: | 482-666 |
| Cow position: | chr19:4520040-4519856 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 137, 69 |
| Conread position: | 482-676 |
| Cow position: | chr19:11079231-11079045 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 174, 123 |
| Conread position: | 482-678 |
| Cow position: | chr19:28339928-28339731 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 495-666 |
| Cow position: | chr19:47325666-47325833 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 152, 73 |
| Conread position: | 507-666 |
| Cow position: | chr19:10619578-10619735 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 99, 119 |
| Conread position: | 511-725 |
| Cow position: | chr19:44158544-44158765 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 517-722 |
| Cow position: | chr19:2156325-2156124 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 549-711 |
| Cow position: | chr19:28447681-28447839 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 63 |
Show alignments to all cow chromosomes.