Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G090098.5 |
| Conread position: | 337-585 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 337-602 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 134 |
| Conread position: | 337-613 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 20 |
| Conread position: | 337-654 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 337-657 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 337-666 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 337-666 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 142, 18 |
| Conread position: | 341-629 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 343-665 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 343-666 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 343-679 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 263, 12 |
| Conread position: | 343-687 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 145, 10 |
| Conread position: | 346-592 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 350-608 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 350-613 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 352-604 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 352-695 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 353-566 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 353-608 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 45 |
| Conread position: | 353-644 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 353-666 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 353-666 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 353-675 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 353-675 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 353-675 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 353-679 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 353-682 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 126, 69 |
| Conread position: | 353-718 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 80 |
| Conread position: | 354-749 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 67, 145 |
| Conread position: | 355-655 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 356-760 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 92 |
| Conread position: | 358-641 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 365-655 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 368-608 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 79 |
| Conread position: | 369-672 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 371-675 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 378-609 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 397-693 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 436-675 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 437-591 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 147 |
| Conread position: | 437-666 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 452-667 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 175 |
| Conread position: | 452-675 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 455-671 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 456-636 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 477-654 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 142, 136 |
| Conread position: | 477-665 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 179, 143 |
| Conread position: | 477-675 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 136 |
| Conread position: | 482-646 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 482-666 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 86 |
| Conread position: | 486-666 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 487-666 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 493-697 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 510-644 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 96, 103 |
| Conread position: | 514-644 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 515-658 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 515-695 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 520-640 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 104 |
| Conread position: | 525-667 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
Show alignments to all cow chromosomes.