Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G090098.5 |
| Conread position: | 337-551 |
| Cow position: | chr28:6049424-6049636 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 16 |
| Conread position: | 337-632 |
| Cow position: | chr28:6951745-6952023 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 18 |
| Conread position: | 340-670 |
| Cow position: | chr28:19380941-19381286 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 343-666 |
| Cow position: | chr28:30126908-30126592 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 343-672 |
| Cow position: | chr28:19220060-19219740 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 344-644 |
| Cow position: | chr28:33064683-33064390 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 108, 9 |
| Conread position: | 352-706 |
| Cow position: | chr28:5933373-5933039 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 101, 77 |
| Conread position: | 353-633 |
| Cow position: | chr28:29042136-29042410 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 353-666 |
| Cow position: | chr28:2052267-2051966 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 353-666 |
| Cow position: | chr28:26920373-26920671 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 354-711 |
| Cow position: | chr28:33200928-33201285 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 169 |
| Conread position: | 357-603 |
| Cow position: | chr28:25581428-25581187 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 357-717 |
| Cow position: | chr28:9715484-9715127 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 122, 13 |
| Conread position: | 358-592 |
| Cow position: | chr28:26251746-26251972 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 95, 72 |
| Conread position: | 365-705 |
| Cow position: | chr28:7340388-7340723 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 64 |
| Conread position: | 368-718 |
| Cow position: | chr28:5703154-5703489 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 452-615 |
| Cow position: | chr28:29048341-29048505 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 452-666 |
| Cow position: | chr28:28148306-28148091 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 175 |
| Conread position: | 477-678 |
| Cow position: | chr28:34846972-34847172 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 169, 128 |
| Conread position: | 482-608 |
| Cow position: | chr28:34652022-34651898 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.