Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G090098.5 |
| Conread position: | 329-718 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 337-566 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 337-670 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 337-672 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 169, 19 |
| Conread position: | 337-687 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 337-722 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 340-601 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 254, 13 |
| Conread position: | 343-598 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 343-603 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 343-606 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 343-666 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 348-597 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 350-628 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 350-632 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 250 |
| Conread position: | 350-695 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 96 |
| Conread position: | 353-564 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 353-603 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 353-603 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 353-611 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 353-665 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 107, 58 |
| Conread position: | 353-666 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 353-666 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 353-675 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 353-711 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 239, 77 |
| Conread position: | 354-716 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 214, 77 |
| Conread position: | 355-622 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 116 |
| Conread position: | 355-679 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 356-672 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 99, 74 |
| Conread position: | 356-675 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 356-722 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 66 |
| Conread position: | 357-592 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 360-637 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 378-666 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 390-644 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 392-711 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 58, 170 |
| Conread position: | 401-637 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 448-644 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 452-637 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 181 |
| Conread position: | 454-687 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 157 |
| Conread position: | 457-722 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 463-580 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 476-706 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 482-675 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 156, 65 |
| Conread position: | 520-711 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 119, 105 |
| Conread position: | 520-711 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 131, 105 |
| Conread position: | 530-716 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.