Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G120099.5 |
| Conread position: | 328-571 |
| Cow position: | chr1:66752671-66752424 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 330-567 |
| Cow position: | chr1:6790733-6790979 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 331-572 |
| Cow position: | chr1:95157004-95156755 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 10 |
| Conread position: | 345-488 |
| Cow position: | chr1:85712412-85712558 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 128 |
| Conread position: | 348-501 |
| Cow position: | chr1:46100867-46100708 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 348-568 |
| Cow position: | chr1:68817822-68817595 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 204 |
| Conread position: | 356-554 |
| Cow position: | chr1:31272459-31272261 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 356-563 |
| Cow position: | chr1:51968524-51968728 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 357-491 |
| Cow position: | chr1:59147359-59147223 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 357-567 |
| Cow position: | chr1:7965835-7966052 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 358-566 |
| Cow position: | chr1:51860576-51860360 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 358-569 |
| Cow position: | chr1:44506958-44507175 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 358-571 |
| Cow position: | chr1:56225770-56225991 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 359-479 |
| Cow position: | chr1:88111861-88111981 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-483 |
| Cow position: | chr1:61542932-61542805 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-484 |
| Cow position: | chr1:37309533-37309404 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-486 |
| Cow position: | chr1:30047611-30047486 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-486 |
| Cow position: | chr1:77880744-77880617 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-487 |
| Cow position: | chr1:43312045-43311913 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-487 |
| Cow position: | chr1:48730843-48730714 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 359-487 |
| Cow position: | chr1:85550092-85549960 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-490 |
| Cow position: | chr1:3914932-3914798 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 359-491 |
| Cow position: | chr1:34771517-34771381 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-491 |
| Cow position: | chr1:45478873-45478741 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-491 |
| Cow position: | chr1:56711613-56711481 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:186288-186158 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:8349332-8349201 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 359-492 |
| Cow position: | chr1:30418055-30417925 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:36875016-36875149 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:41252421-41252287 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:48769788-48769926 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:54157280-54157419 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:68672611-68672479 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:69264796-69264931 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:71916133-71915997 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:81580164-81580300 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 359-492 |
| Cow position: | chr1:86578951-86579085 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-492 |
| Cow position: | chr1:91811768-91811902 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 359-492 |
| Cow position: | chr1:98511913-98512049 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 359-492 |
| Cow position: | chr1:99221365-99221233 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 359-493 |
| Cow position: | chr1:93554822-93554960 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-500 |
| Cow position: | chr1:78068083-78067939 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 119 |
| Conread position: | 359-501 |
| Cow position: | chr1:17317370-17317228 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 359-501 |
| Cow position: | chr1:53308403-53308262 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 359-502 |
| Cow position: | chr1:39068970-39068823 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-530 |
| Cow position: | chr1:4291152-4291322 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 137 |
| Conread position: | 359-536 |
| Cow position: | chr1:49433278-49433087 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-547 |
| Cow position: | chr1:99642381-99642184 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 359-548 |
| Cow position: | chr1:69940837-69940638 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-551 |
| Cow position: | chr1:93528685-93528883 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 359-555 |
| Cow position: | chr1:6941446-6941659 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 359-555 |
| Cow position: | chr1:6958859-6959072 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 359-555 |
| Cow position: | chr1:11729161-11729365 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-555 |
| Cow position: | chr1:45223567-45223769 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 359-555 |
| Cow position: | chr1:72813603-72813810 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 359-555 |
| Cow position: | chr1:102349760-102349566 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 359-556 |
| Cow position: | chr1:54258553-54258763 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 85 |
| Conread position: | 359-557 |
| Cow position: | chr1:17055980-17056185 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 359-557 |
| Cow position: | chr1:61011167-61011370 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-559 |
| Cow position: | chr1:95618628-95618838 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 359-560 |
| Cow position: | chr1:67529041-67529254 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-564 |
| Cow position: | chr1:30983506-30983290 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 359-564 |
| Cow position: | chr1:63078996-63079203 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 359-564 |
| Cow position: | chr1:82337790-82337578 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 359-564 |
| Cow position: | chr1:82880632-82880833 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 359-566 |
| Cow position: | chr1:5751299-5751519 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-566 |
| Cow position: | chr1:38753909-38754121 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-566 |
| Cow position: | chr1:81858916-81858697 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 359-567 |
| Cow position: | chr1:6731167-6731384 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 359-567 |
| Cow position: | chr1:16061018-16060803 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 359-567 |
| Cow position: | chr1:35162396-35162610 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 49, 169 |
| Conread position: | 359-567 |
| Cow position: | chr1:38706868-38706648 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 187 |
| Conread position: | 359-567 |
| Cow position: | chr1:51445874-51446088 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 359-567 |
| Cow position: | chr1:53370071-53370289 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 359-567 |
| Cow position: | chr1:77739708-77739929 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 50, 115 |
| Conread position: | 359-567 |
| Cow position: | chr1:100576045-100575836 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 130, 55 |
| Conread position: | 359-568 |
| Cow position: | chr1:6760048-6759838 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 359-568 |
| Cow position: | chr1:7971397-7971610 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 156 |
| Conread position: | 359-568 |
| Cow position: | chr1:31347948-31347727 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 359-568 |
| Cow position: | chr1:31819097-31819309 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 109 |
| Conread position: | 359-568 |
| Cow position: | chr1:43352668-43352446 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 359-568 |
| Cow position: | chr1:49317510-49317295 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 359-568 |
| Cow position: | chr1:50930989-50930774 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 359-568 |
| Cow position: | chr1:54156748-54156528 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-568 |
| Cow position: | chr1:55229962-55230179 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-568 |
| Cow position: | chr1:72011827-72011616 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 359-568 |
| Cow position: | chr1:76613149-76612927 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 213 |
| Conread position: | 359-568 |
| Cow position: | chr1:88338653-88338856 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 110 |
| Conread position: | 359-568 |
| Cow position: | chr1:96365650-96365855 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 87 |
| Conread position: | 359-568 |
| Cow position: | chr1:101834805-101835022 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 188 |
| Conread position: | 359-568 |
| Cow position: | chr1:102266282-102266064 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 134 |
| Conread position: | 359-569 |
| Cow position: | chr1:242543-242759 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-569 |
| Cow position: | chr1:5006148-5006351 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 359-569 |
| Cow position: | chr1:14206163-14205957 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 133, 139 |
| Conread position: | 359-569 |
| Cow position: | chr1:15102875-15103091 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 359-569 |
| Cow position: | chr1:22192755-22192977 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-569 |
| Cow position: | chr1:23969066-23968858 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 359-569 |
| Cow position: | chr1:34159821-34160035 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 140 |
| Conread position: | 359-569 |
| Cow position: | chr1:36998172-36998389 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 359-569 |
| Cow position: | chr1:42868950-42868744 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 132, 165 |
| Conread position: | 359-569 |
| Cow position: | chr1:56477578-56477792 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-569 |
| Cow position: | chr1:59518908-59519118 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 133, 59 |
| Conread position: | 359-569 |
| Cow position: | chr1:69539677-69539892 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-569 |
| Cow position: | chr1:78079705-78079930 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-569 |
| Cow position: | chr1:92075475-92075687 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 359-569 |
| Cow position: | chr1:97144478-97144264 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-570 |
| Cow position: | chr1:1956347-1956130 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 359-570 |
| Cow position: | chr1:6826310-6826084 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 179 |
| Conread position: | 359-570 |
| Cow position: | chr1:18936847-18936630 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 359-570 |
| Cow position: | chr1:19515633-19515409 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-570 |
| Cow position: | chr1:33998745-33998957 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-570 |
| Cow position: | chr1:39427019-39426809 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 359-570 |
| Cow position: | chr1:40192709-40192495 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 86 |
| Conread position: | 359-570 |
| Cow position: | chr1:48444208-48443983 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-570 |
| Cow position: | chr1:54478315-54478524 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 39, 135 |
| Conread position: | 359-570 |
| Cow position: | chr1:64302258-64302042 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 55, 183 |
| Conread position: | 359-570 |
| Cow position: | chr1:68826918-68826716 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-570 |
| Cow position: | chr1:69695006-69694799 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 32, 176 |
| Conread position: | 359-570 |
| Cow position: | chr1:72422422-72422199 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 359-570 |
| Cow position: | chr1:74084202-74083980 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-570 |
| Cow position: | chr1:74956031-74955824 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 359-570 |
| Cow position: | chr1:101507346-101507558 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 359-571 |
| Cow position: | chr1:8601-8828 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:83918-84120 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:3923814-3923595 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:6394543-6394766 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:6854318-6854110 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:7739934-7740151 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 359-571 |
| Cow position: | chr1:10778549-10778763 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 179 |
| Conread position: | 359-571 |
| Cow position: | chr1:20667756-20667541 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 44, 117 |
| Conread position: | 359-571 |
| Cow position: | chr1:21787322-21787533 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 50, 130 |
| Conread position: | 359-571 |
| Cow position: | chr1:25281671-25281469 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 359-571 |
| Cow position: | chr1:28563580-28563352 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:39418125-39417922 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 359-571 |
| Cow position: | chr1:45555352-45555574 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 114 |
| Conread position: | 359-571 |
| Cow position: | chr1:61391798-61391587 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 359-571 |
| Cow position: | chr1:65318561-65318787 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 359-571 |
| Cow position: | chr1:67919121-67919337 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 123 |
| Conread position: | 359-571 |
| Cow position: | chr1:68863021-68863228 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:70434985-70435194 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 359-571 |
| Cow position: | chr1:71119506-71119730 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 100 |
| Conread position: | 359-571 |
| Cow position: | chr1:72068849-72068624 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 206 |
| Conread position: | 359-571 |
| Cow position: | chr1:72105398-72105610 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 139, 32 |
| Conread position: | 359-571 |
| Cow position: | chr1:78794245-78794027 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:81481396-81481177 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 211 |
| Conread position: | 359-571 |
| Cow position: | chr1:88913306-88913529 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 72 |
| Conread position: | 359-571 |
| Cow position: | chr1:91066165-91065948 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 359-571 |
| Cow position: | chr1:95835812-95835585 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-571 |
| Cow position: | chr1:99609357-99609576 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 359-571 |
| Cow position: | chr1:101632351-101632143 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 173 |
| Conread position: | 359-572 |
| Cow position: | chr1:22730720-22730943 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 359-572 |
| Cow position: | chr1:39224940-39224729 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 135 |
| Conread position: | 359-572 |
| Cow position: | chr1:43311786-43311562 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 203 |
| Conread position: | 359-572 |
| Cow position: | chr1:49980696-49980918 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 359-572 |
| Cow position: | chr1:53622944-53623166 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 108 |
| Conread position: | 359-572 |
| Cow position: | chr1:63530544-63530769 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-576 |
| Cow position: | chr1:45019815-45019595 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 359-578 |
| Cow position: | chr1:16855713-16855486 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 209 |
| Conread position: | 359-578 |
| Cow position: | chr1:51394404-51394633 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 214 |
| Conread position: | 360-530 |
| Cow position: | chr1:24534267-24534093 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 360-551 |
| Cow position: | chr1:31256235-31256041 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 360-557 |
| Cow position: | chr1:24406910-24406719 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 138 |
| Conread position: | 360-563 |
| Cow position: | chr1:75382968-75383164 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 360-569 |
| Cow position: | chr1:97611673-97611466 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 179 |
| Conread position: | 360-571 |
| Cow position: | chr1:22525865-22526083 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 360-571 |
| Cow position: | chr1:100573639-100573419 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 361-501 |
| Cow position: | chr1:8670761-8670906 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-501 |
| Cow position: | chr1:98576035-98576179 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-530 |
| Cow position: | chr1:3762467-3762297 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 55 |
| Conread position: | 361-530 |
| Cow position: | chr1:95057042-95057211 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 29 |
| Conread position: | 361-553 |
| Cow position: | chr1:52370175-52369990 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 361-555 |
| Cow position: | chr1:77720255-77720067 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 361-564 |
| Cow position: | chr1:2462371-2462573 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 131, 53 |
| Conread position: | 361-568 |
| Cow position: | chr1:20000760-20000550 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 361-568 |
| Cow position: | chr1:64572503-64572720 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 361-569 |
| Cow position: | chr1:8287642-8287423 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 108 |
| Conread position: | 361-570 |
| Cow position: | chr1:84811951-84811733 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 128 |
| Conread position: | 361-570 |
| Cow position: | chr1:102768168-102768382 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 183 |
| Conread position: | 361-571 |
| Cow position: | chr1:15333883-15334098 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 361-571 |
| Cow position: | chr1:15547459-15547674 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 361-571 |
| Cow position: | chr1:42541586-42541800 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 186 |
| Conread position: | 361-571 |
| Cow position: | chr1:55428969-55428743 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 361-571 |
| Cow position: | chr1:62235458-62235247 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 361-571 |
| Cow position: | chr1:73721348-73721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 361-572 |
| Cow position: | chr1:5637071-5636862 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 134 |
| Conread position: | 361-574 |
| Cow position: | chr1:53520899-53521118 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 362-500 |
| Cow position: | chr1:71253564-71253425 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 362-558 |
| Cow position: | chr1:68845495-68845310 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 362-568 |
| Cow position: | chr1:42887288-42887074 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 362-570 |
| Cow position: | chr1:43505518-43505732 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 362-570 |
| Cow position: | chr1:55753226-55753011 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 362-571 |
| Cow position: | chr1:6304875-6304668 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 362-571 |
| Cow position: | chr1:24133071-24132854 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 362-571 |
| Cow position: | chr1:45315647-45315423 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 42, 215 |
| Conread position: | 362-571 |
| Cow position: | chr1:49825077-49824857 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 212 |
| Conread position: | 362-571 |
| Cow position: | chr1:79630913-79630710 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 30 |
| Conread position: | 362-571 |
| Cow position: | chr1:89509932-89509722 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 362-571 |
| Cow position: | chr1:91023476-91023259 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 179 |
| Conread position: | 362-572 |
| Cow position: | chr1:96472428-96472626 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 200, 52 |
| Conread position: | 363-570 |
| Cow position: | chr1:6166237-6166440 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 365-558 |
| Cow position: | chr1:70416763-70416564 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 366-564 |
| Cow position: | chr1:89448893-89449100 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 366-568 |
| Cow position: | chr1:23186805-23186595 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 366-568 |
| Cow position: | chr1:41697051-41697260 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 366-571 |
| Cow position: | chr1:81569035-81568820 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 367-493 |
| Cow position: | chr1:84255761-84255891 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-553 |
| Cow position: | chr1:43389054-43388863 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 367-554 |
| Cow position: | chr1:71078966-71078770 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 117 |
| Conread position: | 367-554 |
| Cow position: | chr1:89381269-89381466 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-556 |
| Cow position: | chr1:97090320-97090511 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 150 |
| Conread position: | 367-560 |
| Cow position: | chr1:85339387-85339575 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 367-566 |
| Cow position: | chr1:48206537-48206336 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 39 |
| Conread position: | 367-567 |
| Cow position: | chr1:70538605-70538810 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 200 |
| Conread position: | 367-567 |
| Cow position: | chr1:87197814-87198033 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-568 |
| Cow position: | chr1:81290501-81290710 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 367-568 |
| Cow position: | chr1:93590592-93590384 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 178 |
| Conread position: | 367-569 |
| Cow position: | chr1:197011-196799 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 367-569 |
| Cow position: | chr1:22729050-22729261 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 40, 189 |
| Conread position: | 367-569 |
| Cow position: | chr1:25383663-25383876 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 367-569 |
| Cow position: | chr1:54267943-54267731 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 367-569 |
| Cow position: | chr1:55705252-55705041 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 37, 168 |
| Conread position: | 367-569 |
| Cow position: | chr1:85772003-85772211 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 367-569 |
| Cow position: | chr1:101280740-101280530 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 125, 197 |
| Conread position: | 367-570 |
| Cow position: | chr1:41138150-41137939 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 367-570 |
| Cow position: | chr1:95152865-95153081 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 205 |
| Conread position: | 367-571 |
| Cow position: | chr1:10942100-10941888 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 367-571 |
| Cow position: | chr1:10964286-10964498 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 367-571 |
| Cow position: | chr1:22461244-22461033 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 189 |
| Conread position: | 367-571 |
| Cow position: | chr1:41027069-41027281 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 367-571 |
| Cow position: | chr1:54206820-54206610 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 109 |
| Conread position: | 367-571 |
| Cow position: | chr1:61884907-61885120 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 117 |
| Conread position: | 367-571 |
| Cow position: | chr1:68688577-68688788 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 367-571 |
| Cow position: | chr1:78066543-78066334 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-571 |
| Cow position: | chr1:78838790-78838996 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 136 |
| Conread position: | 367-571 |
| Cow position: | chr1:82936603-82936396 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 367-571 |
| Cow position: | chr1:86057078-86056869 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 367-571 |
| Cow position: | chr1:90904762-90904548 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 367-578 |
| Cow position: | chr1:20104260-20104482 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 368-567 |
| Cow position: | chr1:40212337-40212143 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 135, 46 |
| Conread position: | 368-570 |
| Cow position: | chr1:43855296-43855497 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 124, 46 |
| Conread position: | 368-570 |
| Cow position: | chr1:73551515-73551294 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 368-571 |
| Cow position: | chr1:34686183-34686375 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 368-571 |
| Cow position: | chr1:89158702-89158500 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 369-571 |
| Cow position: | chr1:90621510-90621297 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 156 |
| Conread position: | 369-575 |
| Cow position: | chr1:45575929-45576133 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 371-567 |
| Cow position: | chr1:98583750-98583953 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 372-501 |
| Cow position: | chr1:80422275-80422404 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-563 |
| Cow position: | chr1:46143462-46143266 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 42 |
| Conread position: | 372-568 |
| Cow position: | chr1:99605188-99604986 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 172 |
| Conread position: | 372-571 |
| Cow position: | chr1:37321999-37321801 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 372-571 |
| Cow position: | chr1:43499297-43499101 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 373-571 |
| Cow position: | chr1:48618244-48618038 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 374-568 |
| Cow position: | chr1:101789088-101788891 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 374-570 |
| Cow position: | chr1:7793520-7793327 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 123 |
| Conread position: | 374-571 |
| Cow position: | chr1:32014199-32014401 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 375-530 |
| Cow position: | chr1:83606448-83606279 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 376-570 |
| Cow position: | chr1:55685975-55685770 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 378-569 |
| Cow position: | chr1:87149810-87149609 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 380-492 |
| Cow position: | chr1:19855164-19855275 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 383-555 |
| Cow position: | chr1:76699021-76698856 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 383-571 |
| Cow position: | chr1:41022433-41022626 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 384-500 |
| Cow position: | chr1:52679597-52679713 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-570 |
| Cow position: | chr1:62469075-62469266 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 389-564 |
| Cow position: | chr1:95049848-95049663 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 157 |
| Conread position: | 389-569 |
| Cow position: | chr1:81638564-81638745 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 389-571 |
| Cow position: | chr1:64960415-64960236 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 392-562 |
| Cow position: | chr1:3607823-3607995 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 392-571 |
| Cow position: | chr1:4329881-4329700 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 393-555 |
| Cow position: | chr1:63905239-63905071 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 393-556 |
| Cow position: | chr1:19144903-19144741 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 393-568 |
| Cow position: | chr1:97536310-97536484 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 393-571 |
| Cow position: | chr1:90820453-90820271 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 396-572 |
| Cow position: | chr1:25955923-25956106 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 398-571 |
| Cow position: | chr1:11770209-11770033 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 398-571 |
| Cow position: | chr1:82537955-82538136 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 398-571 |
| Cow position: | chr1:94713133-94712953 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 398-571 |
| Cow position: | chr1:100552004-100552175 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 398-576 |
| Cow position: | chr1:70044380-70044557 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 400-570 |
| Cow position: | chr1:20537237-20537409 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 7 |
| Conread position: | 400-571 |
| Cow position: | chr1:84787301-84787469 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 403-571 |
| Cow position: | chr1:102753893-102754059 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 403-577 |
| Cow position: | chr1:56225503-56225682 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 141 |
| Conread position: | 404-535 |
| Cow position: | chr1:96932308-96932440 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 404-569 |
| Cow position: | chr1:32217277-32217445 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 26 |
| Conread position: | 404-570 |
| Cow position: | chr1:75744897-75745068 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 138 |
| Conread position: | 404-571 |
| Cow position: | chr1:69378564-69378389 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 66 |
| Conread position: | 404-572 |
| Cow position: | chr1:89388379-89388553 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 405-558 |
| Cow position: | chr1:71636287-71636132 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 61 |
| Conread position: | 405-564 |
| Cow position: | chr1:90595534-90595375 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-564 |
| Cow position: | chr1:92363627-92363468 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 405-568 |
| Cow position: | chr1:22828534-22828366 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 405-568 |
| Cow position: | chr1:25022039-25021872 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 405-568 |
| Cow position: | chr1:89835753-89835916 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-569 |
| Cow position: | chr1:41056714-41056886 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 154 |
| Conread position: | 405-569 |
| Cow position: | chr1:42175763-42175935 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 405-569 |
| Cow position: | chr1:70483298-70483128 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 405-571 |
| Cow position: | chr1:63460914-63461087 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 405-571 |
| Cow position: | chr1:79663402-79663244 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 405-571 |
| Cow position: | chr1:87934235-87934072 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 405-571 |
| Cow position: | chr1:98557083-98556909 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 405-571 |
| Cow position: | chr1:100800733-100800560 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 405-576 |
| Cow position: | chr1:32035674-32035501 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 85, 136 |
| Conread position: | 406-560 |
| Cow position: | chr1:96362389-96362240 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 406-569 |
| Cow position: | chr1:40077831-40077997 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 126 |
| Conread position: | 407-567 |
| Cow position: | chr1:10470464-10470627 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 409-571 |
| Cow position: | chr1:75227280-75227116 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 410-556 |
| Cow position: | chr1:47886439-47886286 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 411-571 |
| Cow position: | chr1:30028190-30028023 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 411-571 |
| Cow position: | chr1:53474198-53474357 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 417-571 |
| Cow position: | chr1:69250482-69250641 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 53 |
| Conread position: | 418-571 |
| Cow position: | chr1:80423684-80423524 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 151 |
| Conread position: | 428-568 |
| Cow position: | chr1:40303610-40303753 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 135 |
| Conread position: | 435-555 |
| Cow position: | chr1:39703030-39703145 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 435-567 |
| Cow position: | chr1:50906614-50906476 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 435-568 |
| Cow position: | chr1:77462416-77462545 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 435-569 |
| Cow position: | chr1:37470566-37470698 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 435-571 |
| Cow position: | chr1:2715088-2715227 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 435-571 |
| Cow position: | chr1:70175472-70175333 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 435-571 |
| Cow position: | chr1:73644441-73644299 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 435-571 |
| Cow position: | chr1:98742083-98742225 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 437-568 |
| Cow position: | chr1:45233059-45233189 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 439-571 |
| Cow position: | chr1:43340564-43340424 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 439-572 |
| Cow position: | chr1:23698691-23698825 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 445-569 |
| Cow position: | chr1:8778259-8778130 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 446-560 |
| Cow position: | chr1:80733079-80733193 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 446-581 |
| Cow position: | chr1:45680352-45680488 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.