Cow genome map

Conread name: Ss1.1-Tra1-TCH01G120099.5

Conread position: 327-570
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 13

Conread position: 339-559
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 68, 13

Conread position: 342-557
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 356-487
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 356-492
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 356-553
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 138

Conread position: 357-571
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 357-571
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 189

Conread position: 358-569
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 358-569
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 136

Conread position: 359-478
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 359-485
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 101

Conread position: 359-487
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 359-488
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 359-490
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 359-492
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 359-492
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 31

Conread position: 359-492
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 359-492
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 27

Conread position: 359-492
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 113

Conread position: 359-493
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 359-494
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 359-502
Cow position:
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 359-545
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 359-548
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 359-555
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 359-555
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 143, 181

Conread position: 359-556
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 173

Conread position: 359-557
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 137, 0

Conread position: 359-559
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 168

Conread position: 359-560
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 49

Conread position: 359-564
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 359-564
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 359-564
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 88

Conread position: 359-564
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 133, 0

Conread position: 359-567
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 179

Conread position: 359-567
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 183

Conread position: 359-567
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 359-568
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 100

Conread position: 359-568
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 183

Conread position: 359-568
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 359-568
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 7

Conread position: 359-569
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 139

Conread position: 359-569
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 119

Conread position: 359-570
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 173

Conread position: 359-570
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 202

Conread position: 359-570
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 144, 55

Conread position: 359-570
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 177

Conread position: 359-571
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 123

Conread position: 359-571
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 118

Conread position: 359-571
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 359-571
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 55

Conread position: 359-571
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 47, 137

Conread position: 359-571
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 33

Conread position: 359-571
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 359-571
Cow position:
Alignm length: 217
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 359-571
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 81

Conread position: 359-573
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 116

Conread position: 359-576
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 55, 0

Conread position: 359-576
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 359-576
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 359-577
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 360-488
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 360-488
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 360-501
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 360-555
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 360-567
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 360-569
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 360-571
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 93

Conread position: 360-571
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 360-571
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 131

Conread position: 360-571
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 124

Conread position: 361-571
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 136

Conread position: 362-557
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 362-559
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 183

Conread position: 362-567
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 80

Conread position: 362-571
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 362-571
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 362-571
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 362-589
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 120

Conread position: 363-568
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 112

Conread position: 365-571
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 8

Conread position: 365-571
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 7

Conread position: 366-487
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 367-555
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 367-567
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 367-567
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 367-567
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 367-569
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 367-570
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 74

Conread position: 367-571
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 179

Conread position: 367-571
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 79

Conread position: 367-571
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 120

Conread position: 367-571
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 368-571
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 370-569
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 175

Conread position: 372-558
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 372-569
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 173

Conread position: 372-570
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 100, 173

Conread position: 372-576
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 109

Conread position: 373-569
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 168

Conread position: 373-570
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 124

Conread position: 376-501
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 376-571
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 378-571
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 384-586
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 389-570
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 38

Conread position: 389-586
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 185, 101

Conread position: 391-568
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 393-571
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 393-571
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 21

Conread position: 398-571
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 105, 26

Conread position: 404-571
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 74

Conread position: 404-571
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 160

Conread position: 404-572
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 12, 20

Conread position: 405-553
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 23

Conread position: 405-560
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 139

Conread position: 405-560
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 405-566
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 405-567
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 17

Conread position: 405-567
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 405-569
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 405-569
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 33

Conread position: 405-570
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 61

Conread position: 405-571
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 142

Conread position: 405-572
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 406-559
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 406-571
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 407-571
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 409-570
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 412-571
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 416-570
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 417-614
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 140

Conread position: 434-571
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 48

Conread position: 434-571
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 108

Conread position: 435-567
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 435-568
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 104

Conread position: 435-571
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 121

Conread position: 437-549
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-566
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.