Cow genome map

Conread name: Ss1.1-Tra1-TCH01G120099.5

Conread position: 358-500
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 0

Conread position: 358-571
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 11, 57

Conread position: 359-485
Cow position:
Alignm length: 128
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 359-491
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 359-492
Cow position:
Alignm length: 136
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 359-492
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 102

Conread position: 359-492
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 128

Conread position: 359-492
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 359-492
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 359-500
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 359-501
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 118

Conread position: 359-530
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 359-533
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 62

Conread position: 359-552
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 126

Conread position: 359-556
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 58

Conread position: 359-564
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 359-567
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 359-567
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 359-567
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 359-568
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 66, 71

Conread position: 359-568
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 79

Conread position: 359-568
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 13

Conread position: 359-568
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 68

Conread position: 359-568
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 359-568
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 18

Conread position: 359-568
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 359-569
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 359-569
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 56

Conread position: 359-569
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 82

Conread position: 359-569
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 359-569
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 359-569
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 17

Conread position: 359-570
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 359-570
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 121

Conread position: 359-570
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 143, 56

Conread position: 359-570
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 189

Conread position: 359-571
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 359-571
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 116

Conread position: 359-571
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 161

Conread position: 359-571
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 68

Conread position: 359-571
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 359-571
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 359-571
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 93

Conread position: 359-571
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 109

Conread position: 359-571
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 47

Conread position: 359-572
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 51, 34

Conread position: 359-572
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 144, 38

Conread position: 359-573
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 55, 199

Conread position: 359-577
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 359-591
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 215

Conread position: 360-530
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 35

Conread position: 360-569
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 114

Conread position: 360-569
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 360-571
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 205, 141

Conread position: 361-555
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 361-556
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 44, 176

Conread position: 361-567
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 361-570
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 186

Conread position: 362-560
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 362-566
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 362-567
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 89

Conread position: 362-567
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 362-569
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 130, 44

Conread position: 362-569
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 119

Conread position: 362-569
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 362-570
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 362-571
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 112, 132

Conread position: 362-572
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 67

Conread position: 362-574
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 363-571
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 175

Conread position: 365-570
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 129

Conread position: 366-568
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 366-572
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 43, 188

Conread position: 367-560
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 9

Conread position: 367-564
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 5

Conread position: 367-567
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 86

Conread position: 367-567
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 367-567
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 367-567
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 102

Conread position: 367-569
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 367-569
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 104

Conread position: 367-569
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 367-569
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 155

Conread position: 367-570
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 199

Conread position: 367-570
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 59

Conread position: 367-571
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 367-571
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 70

Conread position: 367-571
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 367-571
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 81

Conread position: 367-582
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 368-568
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 139

Conread position: 368-569
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 114

Conread position: 371-559
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 371-569
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 372-567
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 125, 74

Conread position: 372-568
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 372-571
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 98

Conread position: 372-572
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 55

Conread position: 373-553
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 171

Conread position: 373-563
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 134

Conread position: 373-568
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 373-571
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 374-555
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 115, 0

Conread position: 375-487
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 67

Conread position: 384-571
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 107, 38

Conread position: 392-569
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 29

Conread position: 398-569
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 104

Conread position: 398-572
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 402-568
Cow position:
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 146

Conread position: 402-568
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 120

Conread position: 405-569
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 130

Conread position: 405-570
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 18

Conread position: 405-570
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 63

Conread position: 405-571
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 136

Conread position: 405-571
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 90

Conread position: 405-571
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 405-571
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 405-571
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 63

Conread position: 405-571
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 19

Conread position: 405-571
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 17

Conread position: 410-572
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 415-569
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 421-571
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 133

Conread position: 422-571
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 434-553
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 435-563
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 435-571
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 437-570
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 96

Conread position: 443-571
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.