Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G120099.5 |
| Conread position: | 318-492 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 353-569 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 53, 196 |
| Conread position: | 358-578 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 359-483 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-488 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-488 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 359-491 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 359-492 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-492 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-499 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-500 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-528 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 359-536 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 359-548 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 180 |
| Conread position: | 359-548 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 359-557 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-559 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 133, 57 |
| Conread position: | 359-563 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 359-565 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 359-567 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 359-567 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 217 |
| Conread position: | 359-568 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 140 |
| Conread position: | 359-568 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 359-569 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-570 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 359-570 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 359-570 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 66, 137 |
| Conread position: | 359-570 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 112 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-571 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 182 |
| Conread position: | 359-572 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 203 |
| Conread position: | 360-488 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 119 |
| Conread position: | 360-491 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-564 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 360-569 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 191 |
| Conread position: | 360-572 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 89 |
| Conread position: | 361-548 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 361-578 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 362-570 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 362-571 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 44, 115 |
| Conread position: | 362-571 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 362-571 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 362-571 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 364-571 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 367-501 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 367-555 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 367-555 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 20, 178 |
| Conread position: | 367-558 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 106, 46 |
| Conread position: | 367-558 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 179 |
| Conread position: | 367-560 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 367-564 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 367-567 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 170 |
| Conread position: | 367-567 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 367-567 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 367-570 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 57 |
| Conread position: | 367-571 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 367-571 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 368-568 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 368-568 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 200 |
| Conread position: | 368-571 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 181 |
| Conread position: | 368-572 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 171 |
| Conread position: | 368-572 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 368-577 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 369-567 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 372-553 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 372-571 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 124 |
| Conread position: | 373-569 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 374-571 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 375-560 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 375-569 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 125 |
| Conread position: | 377-569 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 379-564 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 159 |
| Conread position: | 390-571 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 397-571 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 398-563 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 400-571 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 405-567 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 49, 163 |
| Conread position: | 405-568 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 405-568 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 160 |
| Conread position: | 405-569 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 64 |
| Conread position: | 405-569 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 405-570 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 405-570 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 70, 65 |
| Conread position: | 405-571 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 405-571 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 405-572 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 87, 117 |
| Conread position: | 406-548 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 89, 135 |
| Conread position: | 409-537 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 416-570 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 422-569 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 422-572 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 435-569 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 435-569 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 435-571 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 435-584 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 437-571 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 444-577 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 24 |
Show alignments to all cow chromosomes.