Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G120099.5 |
| Conread position: | 313-553 |
| Cow position: | chr28:8516239-8516000 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 345-567 |
| Cow position: | chr28:4163608-4163375 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 348-571 |
| Cow position: | chr28:34843596-34843364 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 349-492 |
| Cow position: | chr28:19295154-19295012 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 358-570 |
| Cow position: | chr28:11411552-11411333 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 208 |
| Conread position: | 358-571 |
| Cow position: | chr28:5441914-5441689 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 359-488 |
| Cow position: | chr28:4765659-4765794 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-491 |
| Cow position: | chr28:25399858-25399989 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 359-492 |
| Cow position: | chr28:2898974-2899111 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-492 |
| Cow position: | chr28:8149647-8149510 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-492 |
| Cow position: | chr28:24706882-24707019 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-492 |
| Cow position: | chr28:27161341-27161205 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 359-492 |
| Cow position: | chr28:29434443-29434306 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-492 |
| Cow position: | chr28:32174614-32174751 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 359-501 |
| Cow position: | chr28:18770069-18770211 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-501 |
| Cow position: | chr28:25249339-25249485 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-516 |
| Cow position: | chr28:20313262-20313423 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-545 |
| Cow position: | chr28:555489-555678 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 167 |
| Conread position: | 359-553 |
| Cow position: | chr28:13048298-13048090 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 359-554 |
| Cow position: | chr28:26743611-26743822 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-555 |
| Cow position: | chr28:21363732-21363932 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 138, 55 |
| Conread position: | 359-556 |
| Cow position: | chr28:4045834-4046037 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 359-560 |
| Cow position: | chr28:7267958-7267752 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 359-563 |
| Cow position: | chr28:616371-616569 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 99 |
| Conread position: | 359-564 |
| Cow position: | chr28:6059485-6059270 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-567 |
| Cow position: | chr28:10053344-10053128 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 187 |
| Conread position: | 359-567 |
| Cow position: | chr28:21008680-21008467 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 69 |
| Conread position: | 359-568 |
| Cow position: | chr28:4937257-4937034 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-568 |
| Cow position: | chr28:8347716-8347939 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 359-569 |
| Cow position: | chr28:4881255-4881043 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 183 |
| Conread position: | 359-569 |
| Cow position: | chr28:5193316-5193529 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 180 |
| Conread position: | 359-569 |
| Cow position: | chr28:10297841-10298045 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 359-569 |
| Cow position: | chr28:22571677-22571478 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 359-570 |
| Cow position: | chr28:3726226-3726001 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 359-570 |
| Cow position: | chr28:7697993-7697773 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 137, 210 |
| Conread position: | 359-570 |
| Cow position: | chr28:17680607-17680832 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 359-570 |
| Cow position: | chr28:21046591-21046382 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 56, 101 |
| Conread position: | 359-570 |
| Cow position: | chr28:23724477-23724262 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 44, 130 |
| Conread position: | 359-571 |
| Cow position: | chr28:3011284-3011058 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 359-571 |
| Cow position: | chr28:3449288-3449518 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-571 |
| Cow position: | chr28:5630083-5630308 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 91 |
| Conread position: | 359-571 |
| Cow position: | chr28:5931341-5931552 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 359-571 |
| Cow position: | chr28:8291414-8291621 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 359-571 |
| Cow position: | chr28:11743834-11743620 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 359-571 |
| Cow position: | chr28:12951408-12951624 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 141, 17 |
| Conread position: | 359-571 |
| Cow position: | chr28:19216807-19217020 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 55, 148 |
| Conread position: | 359-571 |
| Cow position: | chr28:23007745-23007534 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 52, 138 |
| Conread position: | 359-571 |
| Cow position: | chr28:23410340-23410126 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 150 |
| Conread position: | 359-572 |
| Cow position: | chr28:7008993-7008772 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-572 |
| Cow position: | chr28:26372727-26372930 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-573 |
| Cow position: | chr28:19564243-19564024 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 123 |
| Conread position: | 359-574 |
| Cow position: | chr28:30746745-30746526 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 128 |
| Conread position: | 360-492 |
| Cow position: | chr28:32179683-32179815 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 360-556 |
| Cow position: | chr28:5817825-5818031 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 360-559 |
| Cow position: | chr28:24343357-24343549 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 360-569 |
| Cow position: | chr28:4282504-4282284 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 210 |
| Conread position: | 360-571 |
| Cow position: | chr28:3143889-3143677 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 360-572 |
| Cow position: | chr28:13474286-13474508 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 128 |
| Conread position: | 361-559 |
| Cow position: | chr28:6975228-6975430 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 361-570 |
| Cow position: | chr28:5235868-5236080 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 361-571 |
| Cow position: | chr28:4013071-4013291 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 361-571 |
| Cow position: | chr28:10964410-10964616 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 194, 123 |
| Conread position: | 361-571 |
| Cow position: | chr28:11346500-11346282 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 206 |
| Conread position: | 361-571 |
| Cow position: | chr28:11866678-11866459 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-571 |
| Cow position: | chr28:26719330-26719538 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 133 |
| Conread position: | 362-500 |
| Cow position: | chr28:7498159-7498017 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 362-558 |
| Cow position: | chr28:15362567-15362773 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 362-563 |
| Cow position: | chr28:9285382-9285177 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 362-567 |
| Cow position: | chr28:11816678-11816480 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 362-567 |
| Cow position: | chr28:21868445-21868661 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 362-567 |
| Cow position: | chr28:29850827-29850618 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 362-568 |
| Cow position: | chr28:5139003-5138795 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 362-569 |
| Cow position: | chr28:20124772-20124987 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 362-570 |
| Cow position: | chr28:5204183-5204393 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 178 |
| Conread position: | 362-570 |
| Cow position: | chr28:17949125-17948910 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 362-571 |
| Cow position: | chr28:662094-662308 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 140 |
| Conread position: | 362-571 |
| Cow position: | chr28:4643782-4643562 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 362-571 |
| Cow position: | chr28:5254862-5255079 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 362-571 |
| Cow position: | chr28:7132099-7131884 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 206 |
| Conread position: | 362-571 |
| Cow position: | chr28:7619162-7618952 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 161 |
| Conread position: | 362-571 |
| Cow position: | chr28:11987162-11987371 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 362-571 |
| Cow position: | chr28:12055400-12055609 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 363-557 |
| Cow position: | chr28:2279600-2279408 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 127, 58 |
| Conread position: | 363-571 |
| Cow position: | chr28:3492794-3492579 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 364-571 |
| Cow position: | chr28:30937677-30937475 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 364-572 |
| Cow position: | chr28:19039029-19038809 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 367-555 |
| Cow position: | chr28:4090061-4089867 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 367-559 |
| Cow position: | chr28:18797313-18797506 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 367-559 |
| Cow position: | chr28:24646586-24646779 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 167 |
| Conread position: | 367-567 |
| Cow position: | chr28:8396328-8396529 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 158 |
| Conread position: | 367-567 |
| Cow position: | chr28:10589028-10588829 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 367-567 |
| Cow position: | chr28:10615953-10615746 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 178 |
| Conread position: | 367-568 |
| Cow position: | chr28:9426357-9426146 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 367-569 |
| Cow position: | chr28:777668-777882 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-570 |
| Cow position: | chr28:8304240-8304449 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 367-571 |
| Cow position: | chr28:4006779-4006989 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 367-571 |
| Cow position: | chr28:7350647-7350858 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 178 |
| Conread position: | 367-571 |
| Cow position: | chr28:8787533-8787747 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 367-571 |
| Cow position: | chr28:11079301-11079507 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 367-571 |
| Cow position: | chr28:11426548-11426340 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 114 |
| Conread position: | 367-571 |
| Cow position: | chr28:22813255-22813456 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 367-574 |
| Cow position: | chr28:25056959-25057168 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 367-578 |
| Cow position: | chr28:11884528-11884317 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 37, 150 |
| Conread position: | 367-579 |
| Cow position: | chr28:32358101-32358320 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 368-555 |
| Cow position: | chr28:16879567-16879760 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 368-567 |
| Cow position: | chr28:5805665-5805866 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 150 |
| Conread position: | 368-571 |
| Cow position: | chr28:26826217-26826431 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 90 |
| Conread position: | 369-570 |
| Cow position: | chr28:16919173-16918967 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 369-571 |
| Cow position: | chr28:16214878-16214677 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 369-572 |
| Cow position: | chr28:11585207-11585000 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 372-566 |
| Cow position: | chr28:4185905-4186106 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 372-568 |
| Cow position: | chr28:30902124-30902326 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 372-570 |
| Cow position: | chr28:26784243-26784049 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 372-571 |
| Cow position: | chr28:17728101-17727904 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 374-569 |
| Cow position: | chr28:21207368-21207171 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 33, 115 |
| Conread position: | 375-568 |
| Cow position: | chr28:24996612-24996413 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 377-563 |
| Cow position: | chr28:19994943-19994746 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 379-568 |
| Cow position: | chr28:18791046-18791239 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 381-570 |
| Cow position: | chr28:9109223-9109418 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 381-578 |
| Cow position: | chr28:20046560-20046758 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 389-568 |
| Cow position: | chr28:11827703-11827894 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 392-569 |
| Cow position: | chr28:13269749-13269924 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 392-570 |
| Cow position: | chr28:6563873-6563688 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 392-570 |
| Cow position: | chr28:8681408-8681230 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 392-571 |
| Cow position: | chr28:32014802-32014994 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 393-569 |
| Cow position: | chr28:22085523-22085340 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 174 |
| Conread position: | 395-572 |
| Cow position: | chr28:5609892-5609709 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 73 |
| Conread position: | 397-568 |
| Cow position: | chr28:21744742-21744917 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 398-568 |
| Cow position: | chr28:19394899-19395069 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 27 |
| Conread position: | 398-571 |
| Cow position: | chr28:4866543-4866370 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 96, 16 |
| Conread position: | 398-571 |
| Cow position: | chr28:10958830-10959007 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 400-568 |
| Cow position: | chr28:6091393-6091561 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-566 |
| Cow position: | chr28:26868117-26867951 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 404-571 |
| Cow position: | chr28:11305599-11305428 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 91, 163 |
| Conread position: | 405-555 |
| Cow position: | chr28:3914752-3914897 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 405-559 |
| Cow position: | chr28:1099629-1099481 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 405-563 |
| Cow position: | chr28:12933695-12933536 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 405-566 |
| Cow position: | chr28:3746237-3746400 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 405-567 |
| Cow position: | chr28:4876478-4876642 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 405-569 |
| Cow position: | chr28:12991177-12991341 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-569 |
| Cow position: | chr28:21844992-21845156 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 405-571 |
| Cow position: | chr28:3678397-3678566 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 161 |
| Conread position: | 405-571 |
| Cow position: | chr28:4071004-4071166 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 405-571 |
| Cow position: | chr28:7964643-7964470 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 405-571 |
| Cow position: | chr28:24082305-24082478 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 405-577 |
| Cow position: | chr28:2077535-2077718 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 407-567 |
| Cow position: | chr28:10762931-10763092 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 407-571 |
| Cow position: | chr28:26960872-26960705 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 91, 71 |
| Conread position: | 410-569 |
| Cow position: | chr28:16200703-16200534 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 416-571 |
| Cow position: | chr28:8616878-8617023 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 418-566 |
| Cow position: | chr28:21263204-21263357 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 422-570 |
| Cow position: | chr28:4588370-4588520 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 70, 132 |
| Conread position: | 422-570 |
| Cow position: | chr28:24238425-24238277 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 67 |
| Conread position: | 427-569 |
| Cow position: | chr28:7750959-7750814 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 435-563 |
| Cow position: | chr28:10890670-10890542 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-564 |
| Cow position: | chr28:17060131-17060263 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 435-567 |
| Cow position: | chr28:22371602-22371471 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 100 |
| Conread position: | 435-569 |
| Cow position: | chr28:11815011-11814873 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 435-571 |
| Cow position: | chr28:26574475-26574608 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 436-571 |
| Cow position: | chr28:22170214-22170074 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 436-571 |
| Cow position: | chr28:32372310-32372445 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 440-571 |
| Cow position: | chr28:7808709-7808838 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.