Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G120099.5 |
| Conread position: | 346-569 |
| Cow position: | chr5:5016420-5016651 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 350-571 |
| Cow position: | chr5:43858422-43858188 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 353-492 |
| Cow position: | chr5:26723448-26723590 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 356-568 |
| Cow position: | chr5:7713774-7713975 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 356-572 |
| Cow position: | chr5:61455851-61456078 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 357-490 |
| Cow position: | chr5:58555141-58555278 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 358-571 |
| Cow position: | chr5:57101517-57101296 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 359-479 |
| Cow position: | chr5:45574359-45574235 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-484 |
| Cow position: | chr5:52000229-52000353 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 359-488 |
| Cow position: | chr5:4710145-4710013 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-488 |
| Cow position: | chr5:46322792-46322664 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-488 |
| Cow position: | chr5:60747270-60747142 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 359-489 |
| Cow position: | chr5:43992330-43992464 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 359-491 |
| Cow position: | chr5:9369265-9369130 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 359-491 |
| Cow position: | chr5:51490239-51490106 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 359-491 |
| Cow position: | chr5:57737105-57737241 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-492 |
| Cow position: | chr5:21039972-21039841 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 359-492 |
| Cow position: | chr5:29771534-29771671 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-492 |
| Cow position: | chr5:37808657-37808520 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-492 |
| Cow position: | chr5:47323469-47323605 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 359-492 |
| Cow position: | chr5:54311342-54311479 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-492 |
| Cow position: | chr5:56428305-56428173 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 79 |
| Conread position: | 359-500 |
| Cow position: | chr5:45420131-45419986 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 359-500 |
| Cow position: | chr5:49501818-49501673 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-500 |
| Cow position: | chr5:54767902-54767758 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 359-500 |
| Cow position: | chr5:63987439-63987294 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 359-501 |
| Cow position: | chr5:41981378-41981520 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-529 |
| Cow position: | chr5:22643220-22643056 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 52, 62 |
| Conread position: | 359-530 |
| Cow position: | chr5:72564770-72564938 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 139 |
| Conread position: | 359-540 |
| Cow position: | chr5:54350355-54350172 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 359-543 |
| Cow position: | chr5:55795961-55795768 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-548 |
| Cow position: | chr5:41713305-41713495 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 359-556 |
| Cow position: | chr5:64523857-64523649 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-558 |
| Cow position: | chr5:30561938-30562145 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 359-558 |
| Cow position: | chr5:42064211-42064424 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-559 |
| Cow position: | chr5:16893765-16893560 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 122 |
| Conread position: | 359-560 |
| Cow position: | chr5:7723670-7723863 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 136 |
| Conread position: | 359-560 |
| Cow position: | chr5:20779389-20779180 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 359-562 |
| Cow position: | chr5:30845119-30845327 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-567 |
| Cow position: | chr5:52852977-52853193 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-567 |
| Cow position: | chr5:71768489-71768282 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 141, 55 |
| Conread position: | 359-568 |
| Cow position: | chr5:15470940-15471144 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 359-568 |
| Cow position: | chr5:16938016-16937807 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 359-568 |
| Cow position: | chr5:34624965-34625175 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 139 |
| Conread position: | 359-568 |
| Cow position: | chr5:50575790-50575995 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 92 |
| Conread position: | 359-569 |
| Cow position: | chr5:4280452-4280673 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 359-569 |
| Cow position: | chr5:41165094-41165310 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-569 |
| Cow position: | chr5:41935645-41935426 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 87 |
| Conread position: | 359-569 |
| Cow position: | chr5:44848018-44847799 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 359-569 |
| Cow position: | chr5:56860453-56860671 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 359-569 |
| Cow position: | chr5:57062523-57062301 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 212 |
| Conread position: | 359-569 |
| Cow position: | chr5:59627106-59627320 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 183 |
| Conread position: | 359-569 |
| Cow position: | chr5:64140541-64140765 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 215 |
| Conread position: | 359-570 |
| Cow position: | chr5:11769277-11769500 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 213 |
| Conread position: | 359-570 |
| Cow position: | chr5:33273701-33273926 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 359-570 |
| Cow position: | chr5:44163363-44163144 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-571 |
| Cow position: | chr5:2309550-2309328 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 359-571 |
| Cow position: | chr5:3771856-3772072 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 359-571 |
| Cow position: | chr5:5257282-5257057 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 359-571 |
| Cow position: | chr5:6520017-6520236 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 113 |
| Conread position: | 359-571 |
| Cow position: | chr5:11668179-11667954 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 359-571 |
| Cow position: | chr5:12557283-12557057 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 359-571 |
| Cow position: | chr5:14904063-14903837 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 181 |
| Conread position: | 359-571 |
| Cow position: | chr5:16025454-16025253 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-571 |
| Cow position: | chr5:18289137-18289347 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 132, 32 |
| Conread position: | 359-571 |
| Cow position: | chr5:19752313-19752531 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 144, 63 |
| Conread position: | 359-571 |
| Cow position: | chr5:26262668-26262455 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 144, 57 |
| Conread position: | 359-571 |
| Cow position: | chr5:28224459-28224672 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 359-571 |
| Cow position: | chr5:35247104-35246876 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 359-571 |
| Cow position: | chr5:44796727-44796506 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 163 |
| Conread position: | 359-571 |
| Cow position: | chr5:50101370-50101147 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-571 |
| Cow position: | chr5:57756022-57755804 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 359-571 |
| Cow position: | chr5:59626965-59626743 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 359-571 |
| Cow position: | chr5:72903226-72903010 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 359-573 |
| Cow position: | chr5:72045668-72045445 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 197 |
| Conread position: | 359-574 |
| Cow position: | chr5:29828052-29828281 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 112 |
| Conread position: | 359-577 |
| Cow position: | chr5:26990402-26990623 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 174, 33 |
| Conread position: | 359-577 |
| Cow position: | chr5:33560728-33560503 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 208 |
| Conread position: | 359-578 |
| Cow position: | chr5:55955914-55956148 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 360-488 |
| Cow position: | chr5:39258515-39258644 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 360-548 |
| Cow position: | chr5:45225806-45225613 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 360-555 |
| Cow position: | chr5:38717317-38717509 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 360-564 |
| Cow position: | chr5:16214694-16214904 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-567 |
| Cow position: | chr5:49474538-49474328 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 122 |
| Conread position: | 360-568 |
| Cow position: | chr5:5855865-5856087 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 360-568 |
| Cow position: | chr5:60948140-60948359 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 360-569 |
| Cow position: | chr5:40102719-40102520 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 131, 55 |
| Conread position: | 360-570 |
| Cow position: | chr5:73168004-73167785 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 360-571 |
| Cow position: | chr5:4267677-4267890 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 129 |
| Conread position: | 360-571 |
| Cow position: | chr5:43923145-43922940 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 132, 58 |
| Conread position: | 360-571 |
| Cow position: | chr5:56153624-56153830 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 360-583 |
| Cow position: | chr5:30805172-30805394 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 53, 175 |
| Conread position: | 361-529 |
| Cow position: | chr5:56334500-56334332 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 361-530 |
| Cow position: | chr5:65679962-65679784 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 361-542 |
| Cow position: | chr5:57686729-57686540 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 361-548 |
| Cow position: | chr5:69731514-69731691 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 361-559 |
| Cow position: | chr5:47696433-47696242 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 361-567 |
| Cow position: | chr5:56028531-56028319 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 361-567 |
| Cow position: | chr5:57074323-57074111 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 185 |
| Conread position: | 361-569 |
| Cow position: | chr5:36838968-36839175 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 361-571 |
| Cow position: | chr5:15363890-15364099 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 43, 136 |
| Conread position: | 361-571 |
| Cow position: | chr5:18898984-18899186 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 361-571 |
| Cow position: | chr5:55176903-55177111 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 129, 41 |
| Conread position: | 361-577 |
| Cow position: | chr5:72006855-72006644 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 362-563 |
| Cow position: | chr5:30253750-30253962 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 362-563 |
| Cow position: | chr5:30276699-30276909 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 362-563 |
| Cow position: | chr5:40109502-40109706 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 362-563 |
| Cow position: | chr5:69337829-69338036 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 362-567 |
| Cow position: | chr5:12434552-12434761 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 362-567 |
| Cow position: | chr5:56014740-56014948 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 132 |
| Conread position: | 362-568 |
| Cow position: | chr5:28302736-28302530 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 168 |
| Conread position: | 362-569 |
| Cow position: | chr5:44196920-44196702 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 362-569 |
| Cow position: | chr5:50824601-50824811 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 132 |
| Conread position: | 362-570 |
| Cow position: | chr5:47601821-47602037 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 362-571 |
| Cow position: | chr5:2240980-2240759 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 362-571 |
| Cow position: | chr5:22795226-22795436 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 176 |
| Conread position: | 362-571 |
| Cow position: | chr5:39035789-39036012 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 107 |
| Conread position: | 363-501 |
| Cow position: | chr5:55129353-55129495 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 364-556 |
| Cow position: | chr5:17555021-17554820 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 99 |
| Conread position: | 364-570 |
| Cow position: | chr5:64176115-64175901 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 365-559 |
| Cow position: | chr5:47743640-47743839 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 365-564 |
| Cow position: | chr5:60523747-60523950 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 365-571 |
| Cow position: | chr5:35459282-35459065 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 365-572 |
| Cow position: | chr5:26147603-26147819 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 40, 188 |
| Conread position: | 366-585 |
| Cow position: | chr5:3582573-3582799 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 367-491 |
| Cow position: | chr5:12738541-12738417 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-547 |
| Cow position: | chr5:46704285-46704094 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 367-559 |
| Cow position: | chr5:56070873-56071076 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-560 |
| Cow position: | chr5:50600061-50600265 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-563 |
| Cow position: | chr5:14314542-14314738 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 132 |
| Conread position: | 367-563 |
| Cow position: | chr5:29060913-29060717 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 367-567 |
| Cow position: | chr5:17104867-17105071 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 367-568 |
| Cow position: | chr5:30302909-30303108 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 367-569 |
| Cow position: | chr5:56524188-56524390 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 130 |
| Conread position: | 367-570 |
| Cow position: | chr5:74643661-74643455 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 367-571 |
| Cow position: | chr5:21617472-21617685 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 367-571 |
| Cow position: | chr5:56877495-56877700 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 133 |
| Conread position: | 367-571 |
| Cow position: | chr5:57935094-57934890 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 125 |
| Conread position: | 367-571 |
| Cow position: | chr5:62172426-62172628 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 367-571 |
| Cow position: | chr5:65941236-65941020 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 109 |
| Conread position: | 367-571 |
| Cow position: | chr5:69383269-69383481 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 114 |
| Conread position: | 368-571 |
| Cow position: | chr5:12322789-12322581 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 368-571 |
| Cow position: | chr5:38833138-38833344 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 148 |
| Conread position: | 368-571 |
| Cow position: | chr5:65552696-65552491 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 372-548 |
| Cow position: | chr5:25597852-25598036 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 372-567 |
| Cow position: | chr5:44446846-44446649 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 126 |
| Conread position: | 372-568 |
| Cow position: | chr5:34915034-34914827 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 372-569 |
| Cow position: | chr5:54312620-54312827 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 194 |
| Conread position: | 372-570 |
| Cow position: | chr5:19811551-19811749 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 118, 43 |
| Conread position: | 372-571 |
| Cow position: | chr5:26549121-26548913 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 372-571 |
| Cow position: | chr5:45845672-45845460 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 373-570 |
| Cow position: | chr5:36038981-36038776 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 157 |
| Conread position: | 374-553 |
| Cow position: | chr5:38040543-38040356 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 374-557 |
| Cow position: | chr5:51233998-51233808 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 171 |
| Conread position: | 374-571 |
| Cow position: | chr5:9894102-9893895 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 375-567 |
| Cow position: | chr5:46479216-46479021 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 375-568 |
| Cow position: | chr5:35190132-35190333 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 376-564 |
| Cow position: | chr5:44722489-44722290 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 376-570 |
| Cow position: | chr5:69766004-69765805 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 376-571 |
| Cow position: | chr5:51289568-51289371 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 379-563 |
| Cow position: | chr5:36822913-36823091 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 380-560 |
| Cow position: | chr5:44734698-44734508 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 381-556 |
| Cow position: | chr5:16668725-16668908 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 381-567 |
| Cow position: | chr5:34288222-34288028 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 384-568 |
| Cow position: | chr5:19079283-19079470 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 389-547 |
| Cow position: | chr5:51125973-51125812 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 389-568 |
| Cow position: | chr5:57087025-57086835 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 389-571 |
| Cow position: | chr5:7676119-7675928 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 390-569 |
| Cow position: | chr5:5010060-5009881 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 169 |
| Conread position: | 392-564 |
| Cow position: | chr5:41884958-41885137 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 393-571 |
| Cow position: | chr5:57231680-57231861 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 398-569 |
| Cow position: | chr5:31648467-31648643 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 398-578 |
| Cow position: | chr5:37842230-37842042 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 402-556 |
| Cow position: | chr5:42752957-42753111 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 402-570 |
| Cow position: | chr5:34787627-34787801 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 403-568 |
| Cow position: | chr5:12562702-12562533 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 403-570 |
| Cow position: | chr5:56563809-56563977 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 405-555 |
| Cow position: | chr5:65745709-65745554 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 405-567 |
| Cow position: | chr5:15991583-15991419 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 405-568 |
| Cow position: | chr5:21721414-21721249 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 136 |
| Conread position: | 405-568 |
| Cow position: | chr5:37253485-37253649 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 159 |
| Conread position: | 405-569 |
| Cow position: | chr5:29599490-29599324 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 405-569 |
| Cow position: | chr5:35394377-35394211 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 405-569 |
| Cow position: | chr5:50943101-50942932 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 405-570 |
| Cow position: | chr5:52029463-52029631 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 405-570 |
| Cow position: | chr5:60100526-60100691 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 97, 58 |
| Conread position: | 405-570 |
| Cow position: | chr5:60153831-60153996 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 97, 58 |
| Conread position: | 405-570 |
| Cow position: | chr5:60207764-60207934 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 77 |
| Conread position: | 405-571 |
| Cow position: | chr5:6876912-6876736 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 405-571 |
| Cow position: | chr5:22242710-22242544 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 109 |
| Conread position: | 405-571 |
| Cow position: | chr5:29895227-29895401 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 405-571 |
| Cow position: | chr5:34918402-34918572 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 161 |
| Conread position: | 405-572 |
| Cow position: | chr5:22186474-22186637 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 87, 112 |
| Conread position: | 405-573 |
| Cow position: | chr5:49207271-49207097 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 406-569 |
| Cow position: | chr5:12668927-12668764 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 406-569 |
| Cow position: | chr5:58401626-58401793 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 407-572 |
| Cow position: | chr5:9559479-9559644 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 408-567 |
| Cow position: | chr5:57497365-57497200 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 408-571 |
| Cow position: | chr5:74039944-74039776 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 81, 58 |
| Conread position: | 409-567 |
| Cow position: | chr5:22957470-22957629 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 411-569 |
| Cow position: | chr5:46540994-46540832 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 411-571 |
| Cow position: | chr5:8136533-8136689 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 411-571 |
| Cow position: | chr5:12478896-12478743 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 417-534 |
| Cow position: | chr5:33551988-33551872 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 420-570 |
| Cow position: | chr5:14000717-14000868 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 422-571 |
| Cow position: | chr5:64061092-64061243 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 422-577 |
| Cow position: | chr5:12504717-12504557 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 435-567 |
| Cow position: | chr5:18578978-18579115 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 435-568 |
| Cow position: | chr5:22898223-22898092 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 435-568 |
| Cow position: | chr5:58487461-58487600 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 435-569 |
| Cow position: | chr5:71387293-71387427 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-570 |
| Cow position: | chr5:14419924-14419788 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 435-570 |
| Cow position: | chr5:29213247-29213375 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 435-571 |
| Cow position: | chr5:4728160-4728298 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 435-571 |
| Cow position: | chr5:17537587-17537449 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 435-571 |
| Cow position: | chr5:25462174-25462313 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 435-572 |
| Cow position: | chr5:31234798-31234935 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-578 |
| Cow position: | chr5:54149932-54150070 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 438-570 |
| Cow position: | chr5:70545205-70545076 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 443-571 |
| Cow position: | chr5:63004349-63004478 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
Show alignments to all cow chromosomes.