Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01G120099.5 |
| Conread position: | 344-560 |
| Cow position: | chr9:48634834-48635047 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 345-501 |
| Cow position: | chr9:54051837-54051680 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 348-558 |
| Cow position: | chr9:22152026-22152243 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 350-569 |
| Cow position: | chr9:55256494-55256721 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 356-571 |
| Cow position: | chr9:3924495-3924281 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 357-586 |
| Cow position: | chr9:34284004-34283763 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 52, 121 |
| Conread position: | 358-577 |
| Cow position: | chr9:16121573-16121349 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 359-485 |
| Cow position: | chr9:38289277-38289404 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 359-486 |
| Cow position: | chr9:10308952-10309078 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 359-486 |
| Cow position: | chr9:20416461-20416588 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-487 |
| Cow position: | chr9:16300520-16300652 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-488 |
| Cow position: | chr9:11304030-11304159 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-488 |
| Cow position: | chr9:17310516-17310645 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 111 |
| Conread position: | 359-488 |
| Cow position: | chr9:41781703-41781570 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:5594552-5594414 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:17518440-17518577 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:18217050-18217187 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:24652453-24652316 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:26859397-26859267 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:38645297-38645432 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 359-492 |
| Cow position: | chr9:42445934-42446070 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 130 |
| Conread position: | 359-492 |
| Cow position: | chr9:43342378-43342243 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 359-492 |
| Cow position: | chr9:43443850-43443716 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:52258018-52258150 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:52513399-52513536 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:52839832-52839967 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 359-492 |
| Cow position: | chr9:54528561-54528426 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 359-492 |
| Cow position: | chr9:54716557-54716690 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 359-492 |
| Cow position: | chr9:64064314-64064451 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 359-494 |
| Cow position: | chr9:19714129-19713990 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 359-498 |
| Cow position: | chr9:28354567-28354423 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 359-500 |
| Cow position: | chr9:23541347-23541479 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 359-500 |
| Cow position: | chr9:55075083-55075225 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 359-551 |
| Cow position: | chr9:58368948-58369147 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-553 |
| Cow position: | chr9:38846288-38846497 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 359-553 |
| Cow position: | chr9:55287843-55288045 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 359-555 |
| Cow position: | chr9:5163937-5164143 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 189 |
| Conread position: | 359-555 |
| Cow position: | chr9:25400152-25400345 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 359-555 |
| Cow position: | chr9:41964686-41964890 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 359-555 |
| Cow position: | chr9:55529844-55529645 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 139, 64 |
| Conread position: | 359-558 |
| Cow position: | chr9:22443578-22443784 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 50, 130 |
| Conread position: | 359-559 |
| Cow position: | chr9:4630152-4629947 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 359-560 |
| Cow position: | chr9:11123436-11123643 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 359-563 |
| Cow position: | chr9:23970847-23971059 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-564 |
| Cow position: | chr9:56065605-56065399 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 78 |
| Conread position: | 359-564 |
| Cow position: | chr9:64105948-64105736 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 359-565 |
| Cow position: | chr9:26086105-26085889 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 359-567 |
| Cow position: | chr9:4263047-4263258 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 359-567 |
| Cow position: | chr9:29819767-29819556 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 101 |
| Conread position: | 359-567 |
| Cow position: | chr9:31346998-31346780 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 215 |
| Conread position: | 359-567 |
| Cow position: | chr9:42586507-42586718 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 135 |
| Conread position: | 359-567 |
| Cow position: | chr9:44584642-44584431 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 359-567 |
| Cow position: | chr9:56032266-56032487 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 359-568 |
| Cow position: | chr9:5327307-5327091 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 359-568 |
| Cow position: | chr9:14738298-14738081 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-568 |
| Cow position: | chr9:26102772-26102560 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 137, 47 |
| Conread position: | 359-568 |
| Cow position: | chr9:34410347-34410564 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 185 |
| Conread position: | 359-568 |
| Cow position: | chr9:34902060-34902269 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 153, 27 |
| Conread position: | 359-568 |
| Cow position: | chr9:40005523-40005306 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 359-568 |
| Cow position: | chr9:44822275-44822494 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 359-568 |
| Cow position: | chr9:48017030-48016818 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 359-569 |
| Cow position: | chr9:5433681-5433473 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 135 |
| Conread position: | 359-569 |
| Cow position: | chr9:9552139-9551916 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 123 |
| Conread position: | 359-569 |
| Cow position: | chr9:11168779-11168573 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 171 |
| Conread position: | 359-569 |
| Cow position: | chr9:12337951-12337728 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-569 |
| Cow position: | chr9:13670683-13670464 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 359-569 |
| Cow position: | chr9:13742572-13742366 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 359-569 |
| Cow position: | chr9:20579555-20579760 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 133, 17 |
| Conread position: | 359-569 |
| Cow position: | chr9:20901073-20901289 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 359-569 |
| Cow position: | chr9:31216133-31215907 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 359-569 |
| Cow position: | chr9:33347441-33347653 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 50, 136 |
| Conread position: | 359-569 |
| Cow position: | chr9:40215292-40215076 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 115, 206 |
| Conread position: | 359-569 |
| Cow position: | chr9:41679796-41679590 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 125 |
| Conread position: | 359-569 |
| Cow position: | chr9:54677306-54677085 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 137, 27 |
| Conread position: | 359-569 |
| Cow position: | chr9:64629316-64629535 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 359-570 |
| Cow position: | chr9:5500902-5500691 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 60, 138 |
| Conread position: | 359-570 |
| Cow position: | chr9:6879819-6879628 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 359-570 |
| Cow position: | chr9:8998398-8998181 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 173 |
| Conread position: | 359-570 |
| Cow position: | chr9:19903131-19902918 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 37, 150 |
| Conread position: | 359-570 |
| Cow position: | chr9:20091096-20090887 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 359-570 |
| Cow position: | chr9:26477265-26477040 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 215 |
| Conread position: | 359-570 |
| Cow position: | chr9:40507550-40507766 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 201 |
| Conread position: | 359-570 |
| Cow position: | chr9:47214496-47214720 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 218 |
| Conread position: | 359-570 |
| Cow position: | chr9:50310717-50310936 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 129, 70 |
| Conread position: | 359-570 |
| Cow position: | chr9:58979446-58979232 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 98, 128 |
| Conread position: | 359-570 |
| Cow position: | chr9:64637597-64637379 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 125, 161 |
| Conread position: | 359-571 |
| Cow position: | chr9:1877958-1878172 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 133, 8 |
| Conread position: | 359-571 |
| Cow position: | chr9:3387738-3387542 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 359-571 |
| Cow position: | chr9:5110907-5110681 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 359-571 |
| Cow position: | chr9:5342199-5342420 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 359-571 |
| Cow position: | chr9:6852022-6852225 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 359-571 |
| Cow position: | chr9:8723842-8723621 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 359-571 |
| Cow position: | chr9:9311907-9311684 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-571 |
| Cow position: | chr9:17799675-17799461 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 359-571 |
| Cow position: | chr9:21292358-21292581 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 359-571 |
| Cow position: | chr9:26403834-26403621 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 359-571 |
| Cow position: | chr9:28726675-28726903 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-571 |
| Cow position: | chr9:31359652-31359431 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 359-571 |
| Cow position: | chr9:34279011-34279233 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 87, 55 |
| Conread position: | 359-571 |
| Cow position: | chr9:54681556-54681347 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 359-571 |
| Cow position: | chr9:58662288-58662069 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 131, 68 |
| Conread position: | 359-571 |
| Cow position: | chr9:63784865-63785085 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-572 |
| Cow position: | chr9:21383901-21384117 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 143 |
| Conread position: | 359-572 |
| Cow position: | chr9:41283064-41282837 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 359-573 |
| Cow position: | chr9:32307184-32307410 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 359-576 |
| Cow position: | chr9:1751387-1751150 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 188 |
| Conread position: | 359-577 |
| Cow position: | chr9:8992130-8992360 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 359-577 |
| Cow position: | chr9:39135579-39135800 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 359-579 |
| Cow position: | chr9:7805912-7806138 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 359-588 |
| Cow position: | chr9:42497870-42497638 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 360-485 |
| Cow position: | chr9:55889859-55889734 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 115 |
| Conread position: | 360-492 |
| Cow position: | chr9:55084256-55084389 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 360-563 |
| Cow position: | chr9:55321685-55321488 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 134 |
| Conread position: | 360-564 |
| Cow position: | chr9:4580356-4580551 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 360-567 |
| Cow position: | chr9:27345536-27345759 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 360-569 |
| Cow position: | chr9:22318398-22318189 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 360-569 |
| Cow position: | chr9:35832571-35832786 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 360-571 |
| Cow position: | chr9:11030232-11030010 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 361-491 |
| Cow position: | chr9:21888215-21888083 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-492 |
| Cow position: | chr9:34014202-34014337 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-500 |
| Cow position: | chr9:31814338-31814482 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-558 |
| Cow position: | chr9:39149126-39148921 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 361-571 |
| Cow position: | chr9:9516718-9516922 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 129, 29 |
| Conread position: | 361-571 |
| Cow position: | chr9:9595903-9596124 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 361-571 |
| Cow position: | chr9:47869056-47868850 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 362-490 |
| Cow position: | chr9:24243675-24243809 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 362-567 |
| Cow position: | chr9:23955934-23956147 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 362-567 |
| Cow position: | chr9:50382282-50382488 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 133, 52 |
| Conread position: | 362-567 |
| Cow position: | chr9:58452032-58452240 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 362-569 |
| Cow position: | chr9:25557018-25556811 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 131 |
| Conread position: | 362-570 |
| Cow position: | chr9:39011423-39011640 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 362-571 |
| Cow position: | chr9:5756942-5757154 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 129 |
| Conread position: | 362-571 |
| Cow position: | chr9:36628164-36627948 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 362-571 |
| Cow position: | chr9:61303046-61302829 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 363-559 |
| Cow position: | chr9:60355167-60355362 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 365-568 |
| Cow position: | chr9:61847088-61847286 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 366-575 |
| Cow position: | chr9:37199169-37198948 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 367-548 |
| Cow position: | chr9:20637414-20637224 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 367-554 |
| Cow position: | chr9:12910360-12910557 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 367-555 |
| Cow position: | chr9:34958015-34958210 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 367-560 |
| Cow position: | chr9:18380902-18380705 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 367-566 |
| Cow position: | chr9:17872069-17872276 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-569 |
| Cow position: | chr9:11098415-11098623 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 367-569 |
| Cow position: | chr9:41728299-41728088 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 367-570 |
| Cow position: | chr9:5263539-5263331 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 367-571 |
| Cow position: | chr9:3378792-3378588 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 367-571 |
| Cow position: | chr9:9460022-9459815 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 367-571 |
| Cow position: | chr9:11299649-11299847 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 367-571 |
| Cow position: | chr9:22440441-22440647 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 367-571 |
| Cow position: | chr9:26279128-26279347 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 367-571 |
| Cow position: | chr9:28747479-28747691 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 204 |
| Conread position: | 367-571 |
| Cow position: | chr9:34286840-34286624 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-571 |
| Cow position: | chr9:36458042-36457822 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 367-571 |
| Cow position: | chr9:48628069-48627849 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 367-571 |
| Cow position: | chr9:51620483-51620270 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 148 |
| Conread position: | 367-571 |
| Cow position: | chr9:51720859-51721061 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 128 |
| Conread position: | 367-571 |
| Cow position: | chr9:59897630-59897422 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 367-572 |
| Cow position: | chr9:12281012-12280797 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 367-572 |
| Cow position: | chr9:24887247-24887030 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 367-577 |
| Cow position: | chr9:7611751-7611969 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 152 |
| Conread position: | 368-564 |
| Cow position: | chr9:34034295-34034103 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 368-568 |
| Cow position: | chr9:53762736-53762528 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 368-571 |
| Cow position: | chr9:4341119-4341330 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 368-571 |
| Cow position: | chr9:6952143-6951938 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 36, 131 |
| Conread position: | 368-573 |
| Cow position: | chr9:63361679-63361888 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 133 |
| Conread position: | 369-570 |
| Cow position: | chr9:41785249-41785048 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 369-579 |
| Cow position: | chr9:59997997-59998212 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 370-571 |
| Cow position: | chr9:26344930-26345136 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 373-531 |
| Cow position: | chr9:43871010-43870852 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 125 |
| Conread position: | 373-571 |
| Cow position: | chr9:39315885-39315688 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 374-564 |
| Cow position: | chr9:43159787-43159588 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 172 |
| Conread position: | 378-566 |
| Cow position: | chr9:34707282-34707479 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 378-570 |
| Cow position: | chr9:5032872-5033060 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 379-571 |
| Cow position: | chr9:22803942-22804143 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 379-571 |
| Cow position: | chr9:34135745-34135555 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 384-570 |
| Cow position: | chr9:2397831-2397638 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 183 |
| Conread position: | 384-571 |
| Cow position: | chr9:36401641-36401834 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 390-567 |
| Cow position: | chr9:14519366-14519545 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 393-570 |
| Cow position: | chr9:9091091-9091280 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 21, 5 |
| Conread position: | 397-571 |
| Cow position: | chr9:26388215-26388042 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 398-570 |
| Cow position: | chr9:53323779-53323960 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 398-571 |
| Cow position: | chr9:34362744-34362562 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 398-572 |
| Cow position: | chr9:32773218-32773046 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 164, 8 |
| Conread position: | 399-570 |
| Cow position: | chr9:57642512-57642340 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 400-569 |
| Cow position: | chr9:11447804-11447979 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 64 |
| Conread position: | 402-571 |
| Cow position: | chr9:11393205-11393386 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 403-567 |
| Cow position: | chr9:35403584-35403409 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 404-567 |
| Cow position: | chr9:12773690-12773524 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 404-571 |
| Cow position: | chr9:6192459-6192631 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 404-572 |
| Cow position: | chr9:60741183-60741358 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 405-555 |
| Cow position: | chr9:40603667-40603509 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 405-559 |
| Cow position: | chr9:61738921-61738759 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 405-560 |
| Cow position: | chr9:26394350-26394511 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 405-563 |
| Cow position: | chr9:11873305-11873461 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 132 |
| Conread position: | 405-563 |
| Cow position: | chr9:44625211-44625053 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 405-566 |
| Cow position: | chr9:55807630-55807465 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 405-568 |
| Cow position: | chr9:19718341-19718505 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 405-569 |
| Cow position: | chr9:33151741-33151577 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-569 |
| Cow position: | chr9:40984504-40984332 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 405-569 |
| Cow position: | chr9:52648858-52649018 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 405-570 |
| Cow position: | chr9:32052275-32052103 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 405-570 |
| Cow position: | chr9:34917186-34917350 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 405-571 |
| Cow position: | chr9:4256988-4257151 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 405-571 |
| Cow position: | chr9:24079301-24079131 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 405-571 |
| Cow position: | chr9:33101116-33101279 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 405-571 |
| Cow position: | chr9:33584686-33584858 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 405-571 |
| Cow position: | chr9:35295689-35295520 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 405-571 |
| Cow position: | chr9:36634506-36634330 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 405-571 |
| Cow position: | chr9:61300978-61301151 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 405-572 |
| Cow position: | chr9:21387419-21387253 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 153, 80 |
| Conread position: | 405-576 |
| Cow position: | chr9:16115609-16115785 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 406-571 |
| Cow position: | chr9:34024697-34024525 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 406-571 |
| Cow position: | chr9:45141602-45141770 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 407-566 |
| Cow position: | chr9:17769315-17769153 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 156 |
| Conread position: | 407-568 |
| Cow position: | chr9:44918283-44918448 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 159 |
| Conread position: | 407-571 |
| Cow position: | chr9:11380649-11380819 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 408-568 |
| Cow position: | chr9:8628921-8629083 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 411-569 |
| Cow position: | chr9:40587053-40586899 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 411-570 |
| Cow position: | chr9:34666437-34666279 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 411-571 |
| Cow position: | chr9:47928899-47928746 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 411-571 |
| Cow position: | chr9:55284352-55284515 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 412-572 |
| Cow position: | chr9:35932822-35932989 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 417-570 |
| Cow position: | chr9:43013485-43013334 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 418-570 |
| Cow position: | chr9:61434062-61434213 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 422-568 |
| Cow position: | chr9:26493791-26493650 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 422-572 |
| Cow position: | chr9:30194993-30194836 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 435-567 |
| Cow position: | chr9:53120962-53120834 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 435-569 |
| Cow position: | chr9:50648036-50647897 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 435-569 |
| Cow position: | chr9:58734227-58734091 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 435-570 |
| Cow position: | chr9:9495125-9494987 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 435-571 |
| Cow position: | chr9:6237524-6237663 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 435-571 |
| Cow position: | chr9:47469248-47469111 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 435-572 |
| Cow position: | chr9:3946179-3946321 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 435-572 |
| Cow position: | chr9:20712805-20712663 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 436-567 |
| Cow position: | chr9:22360832-22360702 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 437-568 |
| Cow position: | chr9:63713053-63712923 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 440-571 |
| Cow position: | chr9:6700139-6700269 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 441-571 |
| Cow position: | chr9:55577671-55577537 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 443-571 |
| Cow position: | chr9:22447333-22447468 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 444-571 |
| Cow position: | chr9:22228412-22228536 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 450-569 |
| Cow position: | chr9:60036573-60036455 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.