Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H070010.5 |
| Conread position: | 205-822 |
| Cow position: | chr10:8996618-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 208-893 |
| Cow position: | chr10:8996867-8996182 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-800 |
| Cow position: | chr10:9010411-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 224-889 |
| Cow position: | chr10:8996767-8996102 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-905 |
| Cow position: | chr10:8996683-8996002 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 27 |
| Conread position: | 225-889 |
| Cow position: | chr10:8996934-8996270 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 227-893 |
| Cow position: | chr10:9010576-9009910 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-573 |
| Cow position: | chr10:21938995-21938652 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 228-826 |
| Cow position: | chr10:8996511-8995922 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 510, 0 |
| Conread position: | 228-900 |
| Cow position: | chr10:9031330-9031994 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 503, 283 |
| Conread position: | 229-668 |
| Cow position: | chr10:8996342-8995912 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 148 |
| Conread position: | 238-679 |
| Cow position: | chr10:21939069-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 290 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 134, 138 |
| Conread position: | 238-855 |
| Cow position: | chr10:9010481-9009864 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 241-891 |
| Cow position: | chr10:9031259-9031891 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 574, 409 |
| Conread position: | 274-847 |
| Cow position: | chr10:21939201-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 89 |
| Conread position: | 290-918 |
| Cow position: | chr10:21939339-21938727 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 389 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 230, 115 |
| Conread position: | 294-896 |
| Cow position: | chr10:9031228-9031811 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 297-893 |
| Cow position: | chr10:9010590-9009994 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 80 |
| Conread position: | 312-876 |
| Cow position: | chr10:21939249-21938685 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 212 |
| Conread position: | 376-897 |
| Cow position: | chr10:8996867-8996346 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 382-814 |
| Cow position: | chr10:9031232-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 460-896 |
| Cow position: | chr10:9010511-9010075 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 77 |
| Conread position: | 462-847 |
| Cow position: | chr10:9031228-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 464-893 |
| Cow position: | chr10:9010591-9010162 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 157 |
| Conread position: | 529-894 |
| Cow position: | chr10:8996882-8996517 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 546-906 |
| Cow position: | chr10:9031228-9031588 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 83 |
| Conread position: | 640-894 |
| Cow position: | chr10:9010581-9010329 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.