Cow genome map

Conread name: Ss1.1-Tra1-TCH01H070010.5

Conread position: 155-855
Cow position:
Alignm length: 706
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 29

Conread position: 168-886
Cow position:
Alignm length: 722
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 172-848
Cow position:
Alignm length: 681
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 190-896
Cow position:
Alignm length: 708
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 203-575
Cow position:
Alignm length: 375
Alignm identity: 235
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 196, 0

Conread position: 207-893
Cow position:
Alignm length: 688
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 417

Conread position: 208-643
Cow position:
Alignm length: 438
Alignm identity: 263
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 76

Conread position: 208-685
Cow position:
Alignm length: 484
Alignm identity: 301
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 148, 161

Conread position: 208-848
Cow position:
Alignm length: 645
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 236

Conread position: 208-854
Cow position:
Alignm length: 650
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 152

Conread position: 208-881
Cow position:
Alignm length: 676
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 22

Conread position: 208-893
Cow position:
Alignm length: 688
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 149

Conread position: 208-894
Cow position:
Alignm length: 690
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 236

Conread position: 208-894
Cow position:
Alignm length: 689
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 236

Conread position: 209-893
Cow position:
Alignm length: 687
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 168

Conread position: 213-886
Cow position:
Alignm length: 680
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 161

Conread position: 214-818
Cow position:
Alignm length: 607
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 334

Conread position: 214-872
Cow position:
Alignm length: 662
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 319

Conread position: 217-894
Cow position:
Alignm length: 683
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 303

Conread position: 222-646
Cow position:
Alignm length: 426
Alignm identity: 268
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 47

Conread position: 224-482
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 141, 153

Conread position: 224-498
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 141, 153

Conread position: 224-604
Cow position:
Alignm length: 384
Alignm identity: 249
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 141, 150

Conread position: 224-827
Cow position:
Alignm length: 605
Alignm identity: 365
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 392, 401

Conread position: 224-855
Cow position:
Alignm length: 635
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 299

Conread position: 224-873
Cow position:
Alignm length: 654
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 224-873
Cow position:
Alignm length: 652
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 151

Conread position: 224-896
Cow position:
Alignm length: 674
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 38

Conread position: 224-905
Cow position:
Alignm length: 685
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 79

Conread position: 224-906
Cow position:
Alignm length: 687
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 215

Conread position: 226-856
Cow position:
Alignm length: 632
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 8

Conread position: 226-856
Cow position:
Alignm length: 632
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 204

Conread position: 226-873
Cow position:
Alignm length: 650
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 145

Conread position: 228-605
Cow position:
Alignm length: 380
Alignm identity: 248
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 227, 233

Conread position: 228-725
Cow position:
Alignm length: 499
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 309

Conread position: 228-734
Cow position:
Alignm length: 511
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 146

Conread position: 228-750
Cow position:
Alignm length: 527
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 146

Conread position: 228-872
Cow position:
Alignm length: 646
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 291

Conread position: 228-889
Cow position:
Alignm length: 662
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 0

Conread position: 228-893
Cow position:
Alignm length: 667
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 243

Conread position: 228-893
Cow position:
Alignm length: 667
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 159

Conread position: 228-893
Cow position:
Alignm length: 666
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 512, 0

Conread position: 228-896
Cow position:
Alignm length: 672
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 290

Conread position: 229-642
Cow position:
Alignm length: 416
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 229-687
Cow position:
Alignm length: 463
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 144

Conread position: 229-818
Cow position:
Alignm length: 596
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 141

Conread position: 229-859
Cow position:
Alignm length: 636
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 205

Conread position: 229-866
Cow position:
Alignm length: 639
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 494, 488

Conread position: 229-874
Cow position:
Alignm length: 646
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 229-894
Cow position:
Alignm length: 670
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 131

Conread position: 229-894
Cow position:
Alignm length: 669
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 212

Conread position: 229-917
Cow position:
Alignm length: 691
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 44

Conread position: 230-894
Cow position:
Alignm length: 668
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 42

Conread position: 232-855
Cow position:
Alignm length: 625
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 57

Conread position: 232-894
Cow position:
Alignm length: 667
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 36

Conread position: 237-819
Cow position:
Alignm length: 583
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 238-558
Cow position:
Alignm length: 322
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 48

Conread position: 238-604
Cow position:
Alignm length: 367
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 238-855
Cow position:
Alignm length: 622
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 117

Conread position: 238-855
Cow position:
Alignm length: 619
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 522, 532

Conread position: 238-866
Cow position:
Alignm length: 629
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 238-885
Cow position:
Alignm length: 649
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 223

Conread position: 238-885
Cow position:
Alignm length: 650
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 40

Conread position: 238-893
Cow position:
Alignm length: 657
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 39

Conread position: 238-893
Cow position:
Alignm length: 660
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 238-894
Cow position:
Alignm length: 661
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 122

Conread position: 238-894
Cow position:
Alignm length: 659
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 115

Conread position: 239-790
Cow position:
Alignm length: 556
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 136

Conread position: 239-855
Cow position:
Alignm length: 619
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 283

Conread position: 239-866
Cow position:
Alignm length: 631
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 33

Conread position: 240-813
Cow position:
Alignm length: 576
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 25

Conread position: 242-881
Cow position:
Alignm length: 644
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 36

Conread position: 242-885
Cow position:
Alignm length: 645
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 113

Conread position: 242-894
Cow position:
Alignm length: 657
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 118

Conread position: 244-775
Cow position:
Alignm length: 532
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 244-849
Cow position:
Alignm length: 606
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 244-855
Cow position:
Alignm length: 612
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 244-873
Cow position:
Alignm length: 634
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 244-887
Cow position:
Alignm length: 644
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 244-901
Cow position:
Alignm length: 658
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 248-866
Cow position:
Alignm length: 621
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 270

Conread position: 248-898
Cow position:
Alignm length: 652
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 177

Conread position: 249-725
Cow position:
Alignm length: 479
Alignm identity: 289
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 109, 104

Conread position: 249-905
Cow position:
Alignm length: 660
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 367

Conread position: 250-550
Cow position:
Alignm length: 302
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 277, 51

Conread position: 250-854
Cow position:
Alignm length: 606
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 127

Conread position: 250-855
Cow position:
Alignm length: 608
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 121

Conread position: 250-857
Cow position:
Alignm length: 608
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 250-893
Cow position:
Alignm length: 645
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 27

Conread position: 250-894
Cow position:
Alignm length: 646
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 239

Conread position: 253-815
Cow position:
Alignm length: 566
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 89

Conread position: 253-855
Cow position:
Alignm length: 605
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 124

Conread position: 253-893
Cow position:
Alignm length: 642
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 302

Conread position: 253-893
Cow position:
Alignm length: 642
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 515, 507

Conread position: 256-893
Cow position:
Alignm length: 639
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 15

Conread position: 271-874
Cow position:
Alignm length: 605
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 102

Conread position: 271-889
Cow position:
Alignm length: 621
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 25

Conread position: 272-893
Cow position:
Alignm length: 624
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 83

Conread position: 275-802
Cow position:
Alignm length: 530
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 96

Conread position: 278-885
Cow position:
Alignm length: 611
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 20

Conread position: 283-894
Cow position:
Alignm length: 617
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 77

Conread position: 283-917
Cow position:
Alignm length: 638
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 331

Conread position: 290-866
Cow position:
Alignm length: 579
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 330

Conread position: 291-855
Cow position:
Alignm length: 569
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 230

Conread position: 291-893
Cow position:
Alignm length: 603
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 292-833
Cow position:
Alignm length: 545
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 313

Conread position: 292-836
Cow position:
Alignm length: 546
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 83

Conread position: 292-845
Cow position:
Alignm length: 555
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 356

Conread position: 292-855
Cow position:
Alignm length: 568
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 85

Conread position: 292-866
Cow position:
Alignm length: 578
Alignm identity: 349
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 103

Conread position: 292-873
Cow position:
Alignm length: 587
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 81

Conread position: 292-873
Cow position:
Alignm length: 583
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 226

Conread position: 292-905
Cow position:
Alignm length: 619
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 77

Conread position: 292-906
Cow position:
Alignm length: 617
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 333

Conread position: 292-917
Cow position:
Alignm length: 627
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 611, 620

Conread position: 293-917
Cow position:
Alignm length: 626
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 62

Conread position: 297-849
Cow position:
Alignm length: 564
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 244

Conread position: 298-746
Cow position:
Alignm length: 453
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 75

Conread position: 300-886
Cow position:
Alignm length: 591
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 77

Conread position: 301-893
Cow position:
Alignm length: 595
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 469

Conread position: 302-873
Cow position:
Alignm length: 573
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 552, 546

Conread position: 302-886
Cow position:
Alignm length: 586
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 327

Conread position: 302-886
Cow position:
Alignm length: 586
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 240

Conread position: 304-824
Cow position:
Alignm length: 524
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 46

Conread position: 304-845
Cow position:
Alignm length: 543
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 217

Conread position: 305-894
Cow position:
Alignm length: 593
Alignm identity: 369
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 60, 69

Conread position: 310-884
Cow position:
Alignm length: 576
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 310-886
Cow position:
Alignm length: 581
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 45

Conread position: 313-873
Cow position:
Alignm length: 561
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 343-855
Cow position:
Alignm length: 519
Alignm identity: 316
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 22, 31

Conread position: 367-894
Cow position:
Alignm length: 531
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 374-855
Cow position:
Alignm length: 485
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 10

Conread position: 375-883
Cow position:
Alignm length: 509
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 382-655
Cow position:
Alignm length: 274
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 385-894
Cow position:
Alignm length: 516
Alignm identity: 324
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 82, 64

Conread position: 393-862
Cow position:
Alignm length: 471
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 49

Conread position: 394-821
Cow position:
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 394-893
Cow position:
Alignm length: 501
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 412

Conread position: 396-897
Cow position:
Alignm length: 504
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 398-896
Cow position:
Alignm length: 499
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 449-885
Cow position:
Alignm length: 437
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 466-718
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 468-893
Cow position:
Alignm length: 426
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 529-855
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 542-893
Cow position:
Alignm length: 354
Alignm identity: 238
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 33, 16

Conread position: 543-886
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 544-885
Cow position:
Alignm length: 342
Alignm identity: 209
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 552-855
Cow position:
Alignm length: 305
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 75

Conread position: 583-896
Cow position:
Alignm length: 318
Alignm identity: 199
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 34

Conread position: 613-893
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 634-888
Cow position:
Alignm length: 255
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 646-893
Cow position:
Alignm length: 248
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.