Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H070010.5 |
| Conread position: | 168-686 |
| Cow position: | |
| Alignm length: | 522 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 168-894 |
| Cow position: | |
| Alignm length: | 729 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 171-894 |
| Cow position: | |
| Alignm length: | 726 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 175-736 |
| Cow position: | |
| Alignm length: | 565 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 175-894 |
| Cow position: | |
| Alignm length: | 722 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 205-581 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 206-857 |
| Cow position: | |
| Alignm length: | 653 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 110 |
| Conread position: | 208-893 |
| Cow position: | |
| Alignm length: | 687 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 208-893 |
| Cow position: | |
| Alignm length: | 688 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 645, 670 |
| Conread position: | 211-905 |
| Cow position: | |
| Alignm length: | 697 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 8 |
| Conread position: | 217-894 |
| Cow position: | |
| Alignm length: | 681 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 145 |
| Conread position: | 217-929 |
| Cow position: | |
| Alignm length: | 715 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 222-582 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 222-905 |
| Cow position: | |
| Alignm length: | 686 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 390 |
| Conread position: | 224-818 |
| Cow position: | |
| Alignm length: | 597 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 224-843 |
| Cow position: | |
| Alignm length: | 620 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-891 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 477, 465 |
| Conread position: | 224-893 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 633, 642 |
| Conread position: | 224-893 |
| Cow position: | |
| Alignm length: | 670 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-893 |
| Cow position: | |
| Alignm length: | 674 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 224-894 |
| Cow position: | |
| Alignm length: | 672 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 224-894 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 224-905 |
| Cow position: | |
| Alignm length: | 683 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 224-906 |
| Cow position: | |
| Alignm length: | 684 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 306 |
| Conread position: | 225-834 |
| Cow position: | |
| Alignm length: | 613 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 228-894 |
| Cow position: | |
| Alignm length: | 668 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 219 |
| Conread position: | 228-896 |
| Cow position: | |
| Alignm length: | 672 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 228-905 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-836 |
| Cow position: | |
| Alignm length: | 609 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 131 |
| Conread position: | 229-844 |
| Cow position: | |
| Alignm length: | 619 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 229-874 |
| Cow position: | |
| Alignm length: | 649 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 117 |
| Conread position: | 237-885 |
| Cow position: | |
| Alignm length: | 650 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 325 |
| Conread position: | 244-905 |
| Cow position: | |
| Alignm length: | 665 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 250-885 |
| Cow position: | |
| Alignm length: | 637 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 126 |
| Conread position: | 250-896 |
| Cow position: | |
| Alignm length: | 650 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 256-743 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 275-742 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 248, 254 |
| Conread position: | 282-893 |
| Cow position: | |
| Alignm length: | 615 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 290-895 |
| Cow position: | |
| Alignm length: | 608 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 135 |
| Conread position: | 292-887 |
| Cow position: | |
| Alignm length: | 598 |
| Alignm identity: | 337 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 147, 161 |
| Conread position: | 292-894 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 238 |
| Conread position: | 293-894 |
| Cow position: | |
| Alignm length: | 602 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-855 |
| Cow position: | |
| Alignm length: | 558 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-864 |
| Cow position: | |
| Alignm length: | 564 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 316-883 |
| Cow position: | |
| Alignm length: | 569 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 347-894 |
| Cow position: | |
| Alignm length: | 548 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 366-894 |
| Cow position: | |
| Alignm length: | 531 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 145 |
| Conread position: | 375-854 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-894 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 454-854 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 484-893 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 243, 252 |
| Conread position: | 529-894 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 239, 260 |
| Conread position: | 618-895 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 158, 143 |
Show alignments to all cow chromosomes.