Cow genome map

Conread name: Ss1.1-Tra1-TCH01H070010.5

Conread position: 168-686
Cow position: chr17:22473443-22473962 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 168-894
Cow position: chr17:22552323-22551597 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 171-894
Cow position: chr17:22552656-22551933 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 12

Conread position: 175-736
Cow position: chr17:22589734-22589173 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 175-894
Cow position: chr17:22552484-22551765 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 8

Conread position: 205-581
Cow position: chr17:22551866-22551490 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 68

Conread position: 206-857
Cow position: chr17:41440976-41440325 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 110

Conread position: 208-893
Cow position: chr17:22473234-22473916 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 208-893
Cow position: chr17:22553039-22552354 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 645, 670

Conread position: 211-905
Cow position: chr17:22552866-22552174 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 8

Conread position: 217-894
Cow position: chr17:22589944-22589267 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 145

Conread position: 217-929
Cow position: chr17:22553114-22552405 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 56

Conread position: 222-582
Cow position: chr17:22498812-22498461 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 56, 40

Conread position: 222-905
Cow position: chr17:22499400-22498717 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 390

Conread position: 224-818
Cow position: chr17:22589769-22589175 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 38

Conread position: 224-843
Cow position: chr17:22552099-22551480 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 224-891
Cow position: chr17:22452300-22451632 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 465

Conread position: 224-893
Cow position: chr17:22552351-22551682 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 633, 642

Conread position: 224-893
Cow position: chr17:22552771-22552102 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 224-893
Cow position: chr17:22590189-22589520 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 54

Conread position: 224-894
Cow position: chr17:22552183-22551513 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 48

Conread position: 224-894
Cow position: chr17:22589853-22589183 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 70

Conread position: 224-905
Cow position: chr17:22552687-22552006 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 54

Conread position: 224-906
Cow position: chr17:22590105-22589423 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 306

Conread position: 225-834
Cow position: chr17:22499061-22498461 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 51

Conread position: 228-894
Cow position: chr17:22499310-22498644 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 219

Conread position: 228-896
Cow position: chr17:22590269-22589601 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 228-905
Cow position: chr17:22552515-22551838 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 229-836
Cow position: chr17:22499141-22498534 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 131

Conread position: 229-844
Cow position: chr17:22473336-22473952 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 33

Conread position: 229-874
Cow position: chr17:22452379-22451734 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 117

Conread position: 237-885
Cow position: chr17:41441029-41440381 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 325

Conread position: 244-905
Cow position: chr17:22590001-22589340 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 250-885
Cow position: chr17:41441100-41440465 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 126

Conread position: 250-896
Cow position: chr17:41440848-41440202 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 256-743
Cow position: chr17:41440673-41440187 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 303
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 124, 15

Conread position: 275-742
Cow position: chr17:44467908-44468375 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 276
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 248, 254

Conread position: 282-893
Cow position: chr17:22499172-22498561 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 79

Conread position: 290-895
Cow position: chr17:22452402-22451797 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 135

Conread position: 292-887
Cow position: chr17:44467673-44468268 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 337
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 147, 161

Conread position: 292-894
Cow position: chr17:22552871-22552269 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 238

Conread position: 293-894
Cow position: chr17:22553122-22552521 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 298-855
Cow position: chr17:22590283-22589726 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 304-864
Cow position: chr17:44467769-44468329 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 333
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 49

Conread position: 316-883
Cow position: chr17:41441118-41440551 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 60

Conread position: 347-894
Cow position: chr17:22452513-22451966 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 366-894
Cow position: chr17:22452410-22451882 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 145

Conread position: 375-854
Cow position: chr17:22590290-22589811 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 441-894
Cow position: chr17:22553142-22552689 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 454-854
Cow position: chr17:22590295-22589895 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 76

Conread position: 484-893
Cow position: chr17:41441118-41440709 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 243, 252

Conread position: 529-894
Cow position: chr17:22590304-22589939 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 239, 260

Conread position: 618-895
Cow position: chr17:22452410-22452133 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 158, 143

Show alignments to all cow chromosomes.