Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H070010.5 |
| Conread position: | 168-827 |
| Cow position: | chr25:34732417-34731757 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 399 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 172-826 |
| Cow position: | chr25:326609-327268 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 15 |
| Conread position: | 205-885 |
| Cow position: | chr25:34713842-34714522 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 205-893 |
| Cow position: | chr25:326389-327083 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 411 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 227, 220 |
| Conread position: | 207-558 |
| Cow position: | chr25:33127864-33128215 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 292 |
| Conread position: | 207-893 |
| Cow position: | chr25:34447168-34447845 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 535, 0 |
| Conread position: | 208-917 |
| Cow position: | chr25:33306235-33305534 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 47 |
| Conread position: | 210-855 |
| Cow position: | chr25:36800866-36801497 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 217-653 |
| Cow position: | chr25:36801531-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-893 |
| Cow position: | chr25:33157482-33156809 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 550, 541 |
| Conread position: | 222-651 |
| Cow position: | chr25:346441-346869 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 224-686 |
| Cow position: | chr25:23420378-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-739 |
| Cow position: | chr25:22235823-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 295 |
| Conread position: | 224-848 |
| Cow position: | chr25:36800710-36801334 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 224-851 |
| Cow position: | chr25:33299230-33299853 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 586, 0 |
| Conread position: | 224-855 |
| Cow position: | chr25:33298642-33299273 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 48 |
| Conread position: | 224-855 |
| Cow position: | chr25:33299146-33299777 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-881 |
| Cow position: | chr25:34770045-34769388 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-893 |
| Cow position: | chr25:36801046-36801703 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 138 |
| Conread position: | 224-894 |
| Cow position: | chr25:33298810-33299480 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 224-894 |
| Cow position: | chr25:36801130-36801788 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 49 |
| Conread position: | 224-917 |
| Cow position: | chr25:33298894-33299587 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 305 |
| Conread position: | 225-821 |
| Cow position: | chr25:36801371-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-848 |
| Cow position: | chr25:33306049-33305434 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 226-866 |
| Cow position: | chr25:34447103-34447741 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 145 |
| Conread position: | 226-893 |
| Cow position: | chr25:34762826-34763487 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 208 |
| Conread position: | 227-646 |
| Cow position: | chr25:34714116-34714535 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 227-683 |
| Cow position: | chr25:18642173-18641705 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 104, 147 |
| Conread position: | 227-905 |
| Cow position: | chr25:34447020-34447699 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 228-406 |
| Cow position: | chr25:33128053-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 228-605 |
| Cow position: | chr25:23420466-23420843 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-738 |
| Cow position: | chr25:34769705-34769198 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 502, 476 |
| Conread position: | 228-819 |
| Cow position: | chr25:33144848-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 164 |
| Conread position: | 228-855 |
| Cow position: | chr25:34433604-34434216 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 386 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 202, 208 |
| Conread position: | 228-855 |
| Cow position: | chr25:34769873-34769246 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-898 |
| Cow position: | chr25:34433772-34434428 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 400 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 475, 131 |
| Conread position: | 228-905 |
| Cow position: | chr25:34769957-34769281 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 669, 0 |
| Conread position: | 229-490 |
| Cow position: | chr25:33127970-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-570 |
| Cow position: | chr25:34734009-34733668 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 285, 300 |
| Conread position: | 229-709 |
| Cow position: | chr25:33305319-33304844 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 208 |
| Conread position: | 229-856 |
| Cow position: | chr25:33157389-33156763 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 127 |
| Conread position: | 238-414 |
| Cow position: | chr25:34433029-34433205 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 238-651 |
| Cow position: | chr25:33127811-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-828 |
| Cow position: | chr25:25652953-25653540 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 352 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 192, 196 |
| Conread position: | 238-840 |
| Cow position: | chr25:34769779-34769179 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 238-872 |
| Cow position: | chr25:25652617-25653251 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 196 |
| Conread position: | 238-881 |
| Cow position: | chr25:33299076-33299719 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 134 |
| Conread position: | 238-889 |
| Cow position: | chr25:326590-327247 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 353 |
| Conread position: | 238-893 |
| Cow position: | chr25:33298572-33299227 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 238-894 |
| Cow position: | chr25:33298740-33299396 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 292 |
| Conread position: | 238-894 |
| Cow position: | chr25:33298992-33299648 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 240-687 |
| Cow position: | chr25:414763-414325 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 211, 11 |
| Conread position: | 241-688 |
| Cow position: | chr25:25652872-25653319 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 189, 193 |
| Conread position: | 241-805 |
| Cow position: | chr25:23420311-23420875 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 551, 556 |
| Conread position: | 241-894 |
| Cow position: | chr25:34770112-34769459 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 242-893 |
| Cow position: | chr25:36800644-36801295 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 244-833 |
| Cow position: | chr25:25652287-25652876 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 282 |
| Conread position: | 244-855 |
| Cow position: | chr25:25652707-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 204 |
| Conread position: | 244-885 |
| Cow position: | chr25:25652203-25652844 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 522, 526 |
| Conread position: | 248-751 |
| Cow position: | chr25:34763265-34763763 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 182 |
| Conread position: | 250-734 |
| Cow position: | chr25:33127739-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-893 |
| Cow position: | chr25:326353-326999 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 108 |
| Conread position: | 271-854 |
| Cow position: | chr25:34713824-34714407 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 271-905 |
| Cow position: | chr25:34433251-34433862 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 390 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 271-914 |
| Cow position: | chr25:34763120-34763758 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 247 |
| Conread position: | 273-893 |
| Cow position: | chr25:33157513-33156893 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 89 |
| Conread position: | 274-883 |
| Cow position: | chr25:25652569-25653178 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 160 |
| Conread position: | 274-884 |
| Cow position: | chr25:34770163-34769553 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 277-889 |
| Cow position: | chr25:34762793-34763402 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 18 |
| Conread position: | 282-887 |
| Cow position: | chr25:34446991-34447596 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 284-850 |
| Cow position: | chr25:34433495-34434052 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 110 |
| Conread position: | 291-772 |
| Cow position: | chr25:18642193-18641700 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 119, 168 |
| Conread position: | 292-893 |
| Cow position: | chr25:34732461-34731860 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 147 |
| Conread position: | 296-832 |
| Cow position: | chr25:33127702-33128237 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 303-799 |
| Cow position: | chr25:22235819-22236315 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 306-905 |
| Cow position: | chr25:34732615-34732015 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 298 |
| Conread position: | 309-848 |
| Cow position: | chr25:33298558-33299098 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 143 |
| Conread position: | 309-893 |
| Cow position: | chr25:34446934-34447518 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 569, 559 |
| Conread position: | 310-856 |
| Cow position: | chr25:36801372-36801918 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 219 |
| Conread position: | 310-893 |
| Cow position: | chr25:33144846-33145426 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 192 |
| Conread position: | 312-641 |
| Cow position: | chr25:366724-367053 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-744 |
| Cow position: | chr25:34732105-34731675 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 281 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 40, 48 |
| Conread position: | 313-885 |
| Cow position: | chr25:25652188-25652760 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 313-893 |
| Cow position: | chr25:33298479-33299059 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 221 |
| Conread position: | 313-893 |
| Cow position: | chr25:34433020-34433600 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 380 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 206, 292 |
| Conread position: | 314-855 |
| Cow position: | chr25:33306046-33305512 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 314-885 |
| Cow position: | chr25:3663932-3664503 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 348 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 120, 111 |
| Conread position: | 314-893 |
| Cow position: | chr25:33306461-33305888 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 126 |
| Conread position: | 315-848 |
| Cow position: | chr25:36800633-36801166 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 316-809 |
| Cow position: | chr25:34714037-34714530 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 309 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 292, 301 |
| Conread position: | 327-653 |
| Cow position: | chr25:34733995-34733669 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 107 |
| Conread position: | 336-893 |
| Cow position: | chr25:33157533-33156977 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 336-901 |
| Cow position: | chr25:33127658-33128222 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 343-889 |
| Cow position: | chr25:23420329-23420875 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-861 |
| Cow position: | chr25:18642207-18641694 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 99 |
| Conread position: | 361-892 |
| Cow position: | chr25:33305432-33304911 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 11 |
| Conread position: | 366-893 |
| Cow position: | chr25:33306656-33306143 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 159, 21 |
| Conread position: | 375-889 |
| Cow position: | chr25:36800525-36801039 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 95 |
| Conread position: | 378-601 |
| Cow position: | chr25:34433001-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-894 |
| Cow position: | chr25:23420055-23420544 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 394-894 |
| Cow position: | chr25:33144846-33145343 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 166 |
| Conread position: | 397-726 |
| Cow position: | chr25:366725-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 186, 192 |
| Conread position: | 397-894 |
| Cow position: | chr25:36800463-36800960 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 397-897 |
| Cow position: | chr25:25652188-25652688 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 37 |
| Conread position: | 399-824 |
| Cow position: | chr25:4657463-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 308, 301 |
| Conread position: | 400-906 |
| Cow position: | chr25:22235831-22236338 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 311 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 290 |
| Conread position: | 403-809 |
| Cow position: | chr25:346454-346860 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 180, 186 |
| Conread position: | 416-893 |
| Cow position: | chr25:34713801-34714278 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 115 |
| Conread position: | 417-893 |
| Cow position: | chr25:23420319-23420795 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-917 |
| Cow position: | chr25:33127666-33128154 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 446-905 |
| Cow position: | chr25:34770159-34769700 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 448-685 |
| Cow position: | chr25:34432987-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-894 |
| Cow position: | chr25:33306658-33306221 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 85, 30 |
| Conread position: | 449-906 |
| Cow position: | chr25:326381-326837 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 462-886 |
| Cow position: | chr25:36800444-36800868 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 471-849 |
| Cow position: | chr25:22235819-22236197 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 477-901 |
| Cow position: | chr25:34446934-34447358 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 480-917 |
| Cow position: | chr25:346447-346885 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 118, 130 |
| Conread position: | 481-894 |
| Cow position: | chr25:33298479-33298892 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 78 |
| Conread position: | 482-893 |
| Cow position: | chr25:326330-326741 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 170, 177 |
| Conread position: | 494-851 |
| Cow position: | chr25:414761-414411 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 205, 9 |
| Conread position: | 496-822 |
| Cow position: | chr25:34733994-34733668 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 502-893 |
| Cow position: | chr25:34446875-34447266 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 257 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 517-757 |
| Cow position: | chr25:34432971-34433212 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 525-893 |
| Cow position: | chr25:34770164-34769796 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 539-803 |
| Cow position: | chr25:427303-427567 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 71 |
| Conread position: | 560-833 |
| Cow position: | chr25:36844625-36844352 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 562-917 |
| Cow position: | chr25:34732611-34732256 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 141, 132 |
| Conread position: | 565-855 |
| Cow position: | chr25:414774-414490 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 565-894 |
| Cow position: | chr25:366725-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 118, 129 |
| Conread position: | 586-848 |
| Cow position: | chr25:4657444-4657182 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 184, 175 |
| Conread position: | 586-893 |
| Cow position: | chr25:18641403-18641107 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 622-917 |
| Cow position: | chr25:34770151-34769856 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 632-849 |
| Cow position: | chr25:34433003-34433220 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 639-889 |
| Cow position: | chr25:22235819-22236069 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 5 |
| Conread position: | 650-873 |
| Cow position: | chr25:427330-427553 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 702-905 |
| Cow position: | chr25:34432989-34433192 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 89 |
Show alignments to all cow chromosomes.