Cow genome map

Conread name: Ss1.1-Tra1-TCH01H070085.5

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 1-158
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 46

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 76, 48

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 114, 41

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 48

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 48

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 47

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-169
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 79

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 102, 48

Conread position: 1-172
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 96, 48

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 41

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 49

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 45

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-174
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-174
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-174
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 47

Conread position: 1-176
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 47

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 1-178
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 175, 44

Conread position: 1-178
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-186
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 2-150
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 2-161
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 2-163
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 95, 32

Conread position: 2-166
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 2-166
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 2-173
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 3-156
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 32

Conread position: 3-158
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 3-158
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-159
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 95, 46

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-161
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 54

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 3-162
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 132

Conread position: 3-163
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-169
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 3-169
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 3-171
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 3-173
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 3-173
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 3-176
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 3-176
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 3-176
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 3-180
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 3-181
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-192
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 3-208
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 179, 46

Conread position: 4-158
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 39

Conread position: 4-160
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 4-161
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 45

Conread position: 4-166
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 4-168
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 4-168
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 46

Conread position: 4-168
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 46

Conread position: 4-176
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 4-176
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 4-178
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 5-161
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-161
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 44

Conread position: 5-161
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 44

Conread position: 5-182
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 160, 44

Conread position: 5-187
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 8-173
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 11-161
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 31

Conread position: 11-166
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 38

Conread position: 11-169
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 38

Conread position: 11-176
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 11-181
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 12-161
Cow position:
Alignm length: 150
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 12-176
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 12-187
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 13-161
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 13-170
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 36

Conread position: 13-173
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 14-168
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 20

Conread position: 14-187
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 18-176
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 31

Conread position: 40-161
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 48-178
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 55-161
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 55-161
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 55-161
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 55-163
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 57-173
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 0

Show alignments to all cow chromosomes.