Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
| Conread position: | 1-147 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-157 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 1-158 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-158 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 5, 23 |
| Conread position: | 1-158 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-158 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 1-160 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-160 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-160 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-160 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 48 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 105, 41 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-162 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-163 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-163 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-165 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 117, 48 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 1-167 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-168 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-168 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 1-168 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-168 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-168 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 106, 48 |
| Conread position: | 1-168 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-169 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-169 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 129 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 48 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-174 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-187 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 19 |
| Conread position: | 1-187 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-150 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 2-160 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 2-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 2-167 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 2-173 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-165 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-168 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 3-168 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-173 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 42 |
| Conread position: | 3-174 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-175 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 3-176 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-176 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-176 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 4-155 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 4-161 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 45 |
| Conread position: | 4-161 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-166 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 4-169 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 5-161 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 5-161 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 6-169 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 9-169 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 11-158 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 11-160 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 11-161 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 86, 34 |
| Conread position: | 11-161 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 11-161 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 11-161 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 31 |
| Conread position: | 11-161 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 11-172 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 13-168 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 32-162 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 120, 70 |
| Conread position: | 54-159 |
| Cow position: | |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-164 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 54-164 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 55-176 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 60-161 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-181 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 259-561 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 277 |
| Conread position: | 544-989 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 91 |
Show alignments to all cow chromosomes.