Cow genome map
Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
Conread position: | 1-141 |
Cow position: | chr16:48875704-48875843 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 81, 49 |
Conread position: | 1-157 |
Cow position: | chr16:51216846-51216995 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 147, 41 |
Conread position: | 1-159 |
Cow position: | chr16:23054027-23053874 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 76, 46 |
Conread position: | 1-160 |
Cow position: | chr16:10011649-10011803 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 90, 48 |
Conread position: | 1-160 |
Cow position: | chr16:21974759-21974914 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 92, 33 |
Conread position: | 1-160 |
Cow position: | chr16:51598414-51598563 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr16:8065686-8065839 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr16:9097225-9097072 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr16:12251222-12251068 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 85, 11 |
Conread position: | 1-161 |
Cow position: | chr16:13306672-13306823 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-161 |
Cow position: | chr16:15714311-15714158 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-161 |
Cow position: | chr16:38743227-38743073 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1-161 |
Cow position: | chr16:43308366-43308512 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-161 |
Cow position: | chr16:46433125-46433276 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-161 |
Cow position: | chr16:47274525-47274678 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr16:51393188-51393342 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 92, 48 |
Conread position: | 1-161 |
Cow position: | chr16:56595188-56595341 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-164 |
Cow position: | chr16:15905044-15905204 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 11, 31 |
Conread position: | 1-165 |
Cow position: | chr16:34153370-34153526 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-166 |
Cow position: | chr16:12324653-12324499 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr16:3032515-3032675 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-168 |
Cow position: | chr16:10249617-10249777 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr16:17617162-17617321 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 1-168 |
Cow position: | chr16:17665854-17665695 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr16:21442410-21442569 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 131 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 96, 17 |
Conread position: | 1-168 |
Cow position: | chr16:23564337-23564174 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 102, 42 |
Conread position: | 1-168 |
Cow position: | chr16:24672661-24672821 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 93, 48 |
Conread position: | 1-168 |
Cow position: | chr16:34998423-34998584 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 102, 41 |
Conread position: | 1-168 |
Cow position: | chr16:40446467-40446303 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 96, 48 |
Conread position: | 1-169 |
Cow position: | chr16:44138292-44138451 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 134 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 1-171 |
Cow position: | chr16:50442751-50442588 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 96, 48 |
Conread position: | 1-172 |
Cow position: | chr16:56082163-56082326 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-173 |
Cow position: | chr16:7928183-7928347 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 134 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-173 |
Cow position: | chr16:17180358-17180197 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 129 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 138, 30 |
Conread position: | 1-173 |
Cow position: | chr16:18047953-18048117 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr16:28444288-28444452 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr16:29311727-29311561 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 96, 47 |
Conread position: | 1-173 |
Cow position: | chr16:33073686-33073843 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-173 |
Cow position: | chr16:39029894-39030061 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 124 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-178 |
Cow position: | chr16:33705001-33704838 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 102, 48 |
Conread position: | 1-181 |
Cow position: | chr16:10033064-10032893 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-188 |
Cow position: | chr16:20614695-20614521 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 139 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 96, 44 |
Conread position: | 2-158 |
Cow position: | chr16:40029687-40029832 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 2-160 |
Cow position: | chr16:7441902-7442051 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 2-161 |
Cow position: | chr16:28199226-28199077 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 3-158 |
Cow position: | chr16:31559101-31558953 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-160 |
Cow position: | chr16:16232256-16232106 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-160 |
Cow position: | chr16:32301805-32301956 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 3-160 |
Cow position: | chr16:38663511-38663661 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 3-160 |
Cow position: | chr16:46184358-46184207 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 26, 40 |
Conread position: | 3-161 |
Cow position: | chr16:7665837-7665686 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-161 |
Cow position: | chr16:8809900-8810045 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-161 |
Cow position: | chr16:9560288-9560446 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 115 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 52, 43 |
Conread position: | 3-161 |
Cow position: | chr16:20743119-20743265 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 3-161 |
Cow position: | chr16:42992416-42992265 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 3-161 |
Cow position: | chr16:46548065-46548220 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 120 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 87, 46 |
Conread position: | 3-168 |
Cow position: | chr16:16543049-16542891 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 3-168 |
Cow position: | chr16:19282204-19282047 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 3-168 |
Cow position: | chr16:21002175-21002333 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 3-172 |
Cow position: | chr16:15407359-15407520 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 123 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-173 |
Cow position: | chr16:24674476-24674640 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 91, 7 |
Conread position: | 3-203 |
Cow position: | chr16:27326925-27327118 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 146 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 175, 46 |
Conread position: | 4-136 |
Cow position: | chr16:35297598-35297477 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 4-173 |
Cow position: | chr16:27051244-27051083 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 4-178 |
Cow position: | chr16:46552988-46552827 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 5-160 |
Cow position: | chr16:25419056-25419204 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 5-161 |
Cow position: | chr16:2223199-2223348 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 8-160 |
Cow position: | chr16:33646207-33646065 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 8-165 |
Cow position: | chr16:29060576-29060422 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 79, 41 |
Conread position: | 10-161 |
Cow position: | chr16:7910602-7910754 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 40, 52 |
Conread position: | 11-161 |
Cow position: | chr16:33290576-33290433 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 121 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-166 |
Cow position: | chr16:8083738-8083886 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 79, 38 |
Conread position: | 11-173 |
Cow position: | chr16:5382375-5382219 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 102, 34 |
Conread position: | 11-181 |
Cow position: | chr16:29038106-29037945 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 12-161 |
Cow position: | chr16:7812881-7812739 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 117 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 12-161 |
Cow position: | chr16:15949320-15949459 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 12-166 |
Cow position: | chr16:51143987-51143843 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 88, 30 |
Conread position: | 12-168 |
Cow position: | chr16:13698706-13698557 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 12-172 |
Cow position: | chr16:31241104-31241255 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 15-180 |
Cow position: | chr16:24202676-24202836 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 52, 27 |
Conread position: | 15-187 |
Cow position: | chr16:9730019-9730182 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 40-173 |
Cow position: | chr16:38390147-38390017 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 45-168 |
Cow position: | chr16:43758479-43758604 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 55-158 |
Cow position: | chr16:8522235-8522338 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 55-161 |
Cow position: | chr16:9596519-9596419 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 55-168 |
Cow position: | chr16:34412957-34412850 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 55-173 |
Cow position: | chr16:20205616-20205499 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 55-178 |
Cow position: | chr16:4192279-4192401 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 95 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 55-178 |
Cow position: | chr16:12220838-12220714 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 33, 110 |
Show alignments to all cow chromosomes.