Cow genome map
Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
Conread position: | 1-156 |
Cow position: | chr18:17390825-17390974 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 73, 48 |
Conread position: | 1-156 |
Cow position: | chr18:38211324-38211176 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1-159 |
Cow position: | chr18:37690316-37690167 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-160 |
Cow position: | chr18:23809956-23810104 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-161 |
Cow position: | chr18:1571074-1571222 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-161 |
Cow position: | chr18:3709396-3709245 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr18:5189526-5189678 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr18:10214026-10214176 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 155, 48 |
Conread position: | 1-161 |
Cow position: | chr18:16659263-16659417 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 105, 48 |
Conread position: | 1-161 |
Cow position: | chr18:21528815-21528662 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 140, 48 |
Conread position: | 1-161 |
Cow position: | chr18:31159107-31159258 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 115, 44 |
Conread position: | 1-161 |
Cow position: | chr18:39623969-39623815 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 102, 48 |
Conread position: | 1-161 |
Cow position: | chr18:42427781-42427635 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-161 |
Cow position: | chr18:50004541-50004690 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-162 |
Cow position: | chr18:5632430-5632282 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-163 |
Cow position: | chr18:9642711-9642871 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-163 |
Cow position: | chr18:50959654-50959501 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1-166 |
Cow position: | chr18:4489736-4489898 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 85, 41 |
Conread position: | 1-166 |
Cow position: | chr18:45903731-45903887 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-166 |
Cow position: | chr18:49602877-49603033 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-168 |
Cow position: | chr18:2773222-2773384 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 93, 42 |
Conread position: | 1-168 |
Cow position: | chr18:14871439-14871596 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-168 |
Cow position: | chr18:27079032-27078872 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 120 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr18:29372035-29371875 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 120 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-168 |
Cow position: | chr18:35795055-35795214 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr18:49970486-49970645 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 130 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1-168 |
Cow position: | chr18:52387053-52387212 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-169 |
Cow position: | chr18:8208258-8208417 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 105, 41 |
Conread position: | 1-171 |
Cow position: | chr18:2576528-2576694 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 128 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 88, 48 |
Conread position: | 1-171 |
Cow position: | chr18:3164348-3164508 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-172 |
Cow position: | chr18:21751545-21751383 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 135 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr18:237948-238112 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1-173 |
Cow position: | chr18:22045246-22045409 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr18:44514255-44514090 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 105, 44 |
Conread position: | 1-176 |
Cow position: | chr18:47175213-47175380 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 2-161 |
Cow position: | chr18:10668499-10668348 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 2-161 |
Cow position: | chr18:31556993-31557145 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 130 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 2-173 |
Cow position: | chr18:37187830-37187993 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 3-153 |
Cow position: | chr18:7487398-7487255 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 3-160 |
Cow position: | chr18:11657822-11657672 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 3-160 |
Cow position: | chr18:16382024-16381874 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 3-161 |
Cow position: | chr18:24266240-24266392 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 93, 46 |
Conread position: | 3-161 |
Cow position: | chr18:43283593-43283741 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 3-176 |
Cow position: | chr18:52251691-52251856 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 138 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 3-176 |
Cow position: | chr18:55692981-55692817 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-187 |
Cow position: | chr18:3212043-3211868 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 134 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 4-159 |
Cow position: | chr18:46048916-46048769 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 4-161 |
Cow position: | chr18:35857762-35857909 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 4-173 |
Cow position: | chr18:39662943-39662783 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 128 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 93, 45 |
Conread position: | 8-161 |
Cow position: | chr18:35874236-35874093 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 11-157 |
Cow position: | chr18:25757159-25757297 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 11-160 |
Cow position: | chr18:34490436-34490297 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 11-161 |
Cow position: | chr18:12273809-12273673 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 11-161 |
Cow position: | chr18:34389226-34389368 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 11-166 |
Cow position: | chr18:49440998-49440851 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 116 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 11-176 |
Cow position: | chr18:24022770-24022619 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-176 |
Cow position: | chr18:47417155-47417003 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 127 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 15-176 |
Cow position: | chr18:23821673-23821831 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 21, 10 |
Conread position: | 47-161 |
Cow position: | chr18:23446932-23447046 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 9, 49 |
Conread position: | 55-161 |
Cow position: | chr18:21782807-21782702 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 90 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 55-168 |
Cow position: | chr18:24508106-24508222 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 98 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 31, 112 |
Conread position: | 55-172 |
Cow position: | chr18:47920867-47920751 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 55-174 |
Cow position: | chr18:41253661-41253543 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 55-176 |
Cow position: | chr18:52383025-52382905 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 56-161 |
Cow position: | chr18:35171468-35171363 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 87 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 57-188 |
Cow position: | chr18:15351609-15351742 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 23, 108 |
Conread position: | 60-161 |
Cow position: | chr18:45185988-45185887 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.