Cow genome map

Conread name: Ss1.1-Tra1-TCH01H070085.5

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-158
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 49

Conread position: 1-158
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 45

Conread position: 1-158
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-158
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 48

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-160
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 33

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 1-161
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 28

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 53

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-161
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 44

Conread position: 1-161
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 48

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 48

Conread position: 1-162
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 48

Conread position: 1-163
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 117, 48

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-168
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 41

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 99, 41

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 104, 48

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 49

Conread position: 1-173
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 48

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-173
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 164

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 2-155
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 29

Conread position: 2-157
Cow position:
Alignm length: 156
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-160
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 2-161
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 2-166
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 47

Conread position: 2-179
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 165, 40

Conread position: 3-143
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 43

Conread position: 3-160
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-160
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 3-161
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 46

Conread position: 3-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 46

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 3-162
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 42

Conread position: 3-166
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-166
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-167
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 3-168
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 3-173
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 3-176
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 3-176
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 39

Conread position: 4-157
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 4-161
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 4-173
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 123

Conread position: 4-176
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 5-168
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 8-158
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 8-161
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 11-161
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 11-161
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 11-163
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 11-165
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 11-166
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 11-167
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 11-168
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 11-169
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 11-173
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 38

Conread position: 12-160
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 12-161
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 12-161
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 37

Conread position: 12-168
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 14-161
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 14-161
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 35

Conread position: 14-176
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 17-168
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 32

Conread position: 18-181
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 29-160
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 9

Conread position: 55-161
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 55-161
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 55-187
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 56-159
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 56-181
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 56-187
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 109

Conread position: 60-161
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 62-188
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 0

Show alignments to all cow chromosomes.