Cow genome map
Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
Conread position: | 1-146 |
Cow position: | chr23:27307949-27307811 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-155 |
Cow position: | chr23:3890371-3890518 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 116, 41 |
Conread position: | 1-158 |
Cow position: | chr23:35239552-35239404 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-161 |
Cow position: | chr23:164966-164810 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 1-161 |
Cow position: | chr23:799465-799618 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr23:4003850-4003697 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 128 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-161 |
Cow position: | chr23:20557641-20557794 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr23:33232499-33232651 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 126 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr23:35930149-35930001 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-166 |
Cow position: | chr23:24718602-24718756 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr23:8698626-8698464 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 78, 41 |
Conread position: | 1-168 |
Cow position: | chr23:12363418-12363574 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr23:13137738-13137892 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-168 |
Cow position: | chr23:23104289-23104444 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr23:35656610-35656452 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 94, 48 |
Conread position: | 1-169 |
Cow position: | chr23:29330511-29330351 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-172 |
Cow position: | chr23:5605466-5605299 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 123, 48 |
Conread position: | 1-172 |
Cow position: | chr23:5612726-5612559 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 123, 48 |
Conread position: | 1-173 |
Cow position: | chr23:4291558-4291394 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr23:5617776-5617613 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr23:16582705-16582870 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 11, 49 |
Conread position: | 1-173 |
Cow position: | chr23:35527282-35527119 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1-180 |
Cow position: | chr23:21539358-21539186 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 137 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 105, 46 |
Conread position: | 1-192 |
Cow position: | chr23:10853248-10853067 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 136 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 2-160 |
Cow position: | chr23:10497896-10497749 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 69, 48 |
Conread position: | 2-161 |
Cow position: | chr23:3204986-3204829 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 122 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 73, 41 |
Conread position: | 2-173 |
Cow position: | chr23:37993376-37993211 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 89, 47 |
Conread position: | 3-156 |
Cow position: | chr23:5436441-5436587 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 5, 9 |
Conread position: | 3-160 |
Cow position: | chr23:187378-187230 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-161 |
Cow position: | chr23:1656093-1655945 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 3-161 |
Cow position: | chr23:3270498-3270349 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 3-161 |
Cow position: | chr23:4521682-4521834 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 98, 46 |
Conread position: | 3-163 |
Cow position: | chr23:5436801-5436954 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 9, 40 |
Conread position: | 3-163 |
Cow position: | chr23:17462791-17462638 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-169 |
Cow position: | chr23:4803162-4803002 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-169 |
Cow position: | chr23:30617277-30617435 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 3-169 |
Cow position: | chr23:39813701-39813541 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 162, 46 |
Conread position: | 3-173 |
Cow position: | chr23:32126504-32126345 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 3-176 |
Cow position: | chr23:38229-38064 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 3-176 |
Cow position: | chr23:307657-307492 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 140 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 3-176 |
Cow position: | chr23:3982981-3983155 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 132 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 56, 91 |
Conread position: | 3-176 |
Cow position: | chr23:4416086-4416251 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-176 |
Cow position: | chr23:39056957-39056793 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 127 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 129, 31 |
Conread position: | 4-161 |
Cow position: | chr23:1480840-1480690 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 4-161 |
Cow position: | chr23:10676052-10675902 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 11-158 |
Cow position: | chr23:18739270-18739410 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-160 |
Cow position: | chr23:26975276-26975413 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-161 |
Cow position: | chr23:9726348-9726491 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 11-161 |
Cow position: | chr23:27526777-27526635 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 120 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 11-163 |
Cow position: | chr23:21664503-21664353 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 42, 71 |
Conread position: | 11-169 |
Cow position: | chr23:32621479-32621327 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 154, 38 |
Conread position: | 11-176 |
Cow position: | chr23:3234587-3234745 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 96, 38 |
Conread position: | 12-168 |
Cow position: | chr23:24779350-24779499 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 55-158 |
Cow position: | chr23:36307558-36307660 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 55-176 |
Cow position: | chr23:306679-306559 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 103 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 55-176 |
Cow position: | chr23:3979605-3979726 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 100, 109 |
Conread position: | 56-176 |
Cow position: | chr23:1701327-1701208 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 58-181 |
Cow position: | chr23:38118111-38117989 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.