Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
| Conread position: | 1-158 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 48 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-160 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-166 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 1-168 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-172 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 1-173 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 1-174 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-188 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 2-165 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 3-156 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 3-156 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-170 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 163, 39 |
| Conread position: | 3-173 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-178 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 46 |
| Conread position: | 3-193 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 177, 31 |
| Conread position: | 4-159 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-159 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 4-161 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 11-160 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 11-161 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 11-161 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 146, 38 |
| Conread position: | 11-163 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 12-161 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 12-178 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 13-161 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 13-166 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 14-173 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 15-160 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 54-150 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-178 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 57-163 |
| Cow position: | |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.