Cow genome map
Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
Conread position: | 1-145 |
Cow position: | chr27:28896634-28896773 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 6, 50 |
Conread position: | 1-150 |
Cow position: | chr27:26481440-26481296 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 11, 51 |
Conread position: | 1-153 |
Cow position: | chr27:24952194-24952054 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 1-157 |
Cow position: | chr27:16275922-16275775 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-158 |
Cow position: | chr27:21054215-21054365 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-159 |
Cow position: | chr27:19576565-19576417 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 127 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 20, 49 |
Conread position: | 1-159 |
Cow position: | chr27:28922137-28921986 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-160 |
Cow position: | chr27:19779635-19779784 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1-160 |
Cow position: | chr27:23594077-23594229 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1-161 |
Cow position: | chr27:11208799-11208646 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 127 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-161 |
Cow position: | chr27:11480880-11480728 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-161 |
Cow position: | chr27:11982890-11982738 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 127 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-161 |
Cow position: | chr27:15669016-15668863 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr27:16103569-16103719 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-161 |
Cow position: | chr27:18791756-18791601 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 138, 48 |
Conread position: | 1-161 |
Cow position: | chr27:20897262-20897113 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr27:21978385-21978230 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 93, 33 |
Conread position: | 1-161 |
Cow position: | chr27:27438750-27438597 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-166 |
Cow position: | chr27:178621-178776 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-166 |
Cow position: | chr27:7412151-7412306 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 11, 49 |
Conread position: | 1-166 |
Cow position: | chr27:10581292-10581446 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-166 |
Cow position: | chr27:11133846-11134000 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-166 |
Cow position: | chr27:23452221-23452375 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-166 |
Cow position: | chr27:31183331-31183489 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 90, 9 |
Conread position: | 1-168 |
Cow position: | chr27:19074265-19074107 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-168 |
Cow position: | chr27:22583501-22583662 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 93, 48 |
Conread position: | 1-168 |
Cow position: | chr27:28932044-28931886 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-172 |
Cow position: | chr27:18507403-18507568 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-173 |
Cow position: | chr27:4487022-4486856 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 124 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 160, 48 |
Conread position: | 1-173 |
Cow position: | chr27:9504311-9504476 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-173 |
Cow position: | chr27:12284752-12284914 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-173 |
Cow position: | chr27:18558116-18558280 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr27:20266468-20266306 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-173 |
Cow position: | chr27:23232670-23232835 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 119, 41 |
Conread position: | 1-173 |
Cow position: | chr27:26118255-26118419 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1-173 |
Cow position: | chr27:29877718-29877553 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-174 |
Cow position: | chr27:15453971-15454131 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1-176 |
Cow position: | chr27:30868993-30868818 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 135 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 114, 50 |
Conread position: | 1-176 |
Cow position: | chr27:31386872-31386709 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-187 |
Cow position: | chr27:26112160-26111982 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 2-149 |
Cow position: | chr27:26467802-26467662 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 2-158 |
Cow position: | chr27:12459047-12459194 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 116, 40 |
Conread position: | 2-161 |
Cow position: | chr27:29693226-29693386 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 121 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 74, 43 |
Conread position: | 2-174 |
Cow position: | chr27:24331473-24331641 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 3-153 |
Cow position: | chr27:30441462-30441605 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 117, 42 |
Conread position: | 3-158 |
Cow position: | chr27:7935395-7935252 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 3-161 |
Cow position: | chr27:2592297-2592450 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 126 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 88, 46 |
Conread position: | 3-161 |
Cow position: | chr27:10979620-10979771 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 3-161 |
Cow position: | chr27:26245786-26245635 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-165 |
Cow position: | chr27:31157570-31157724 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-173 |
Cow position: | chr27:672424-672587 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 105, 31 |
Conread position: | 3-176 |
Cow position: | chr27:16965335-16965501 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 162, 39 |
Conread position: | 3-181 |
Cow position: | chr27:8062592-8062423 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 9, 47 |
Conread position: | 4-176 |
Cow position: | chr27:21951219-21951056 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 6-169 |
Cow position: | chr27:22602938-22603101 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 84, 43 |
Conread position: | 7-159 |
Cow position: | chr27:26624971-26625115 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 8-161 |
Cow position: | chr27:13318212-13318066 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 9-171 |
Cow position: | chr27:23177546-23177395 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 10-229 |
Cow position: | chr27:15434083-15434300 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 12, 25 |
Conread position: | 11-161 |
Cow position: | chr27:26314357-26314215 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-163 |
Cow position: | chr27:30914775-30914920 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-165 |
Cow position: | chr27:26317834-26317978 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 11-169 |
Cow position: | chr27:16705021-16705166 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 12-156 |
Cow position: | chr27:27012465-27012602 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 117 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 12-161 |
Cow position: | chr27:232320-232462 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 12-161 |
Cow position: | chr27:23554560-23554419 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 12-161 |
Cow position: | chr27:26909819-26909683 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 12-163 |
Cow position: | chr27:19660697-19660842 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 83, 22 |
Conread position: | 13-173 |
Cow position: | chr27:26188597-26188749 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 46-161 |
Cow position: | chr27:5553263-5553378 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 54-161 |
Cow position: | chr27:26154122-26154229 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 88 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 54-173 |
Cow position: | chr27:27747664-27747546 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 55-161 |
Cow position: | chr27:17908456-17908351 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 86 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 55-161 |
Cow position: | chr27:24303745-24303855 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 92 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 55-173 |
Cow position: | chr27:30261090-30260973 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 55-176 |
Cow position: | chr27:23060311-23060191 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 57-162 |
Cow position: | chr27:20045698-20045804 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.