Cow genome map
Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
Conread position: | 1-158 |
Cow position: | chr28:2821464-2821314 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-158 |
Cow position: | chr28:4013286-4013140 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 124 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-158 |
Cow position: | chr28:9705859-9705706 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 88, 40 |
Conread position: | 1-160 |
Cow position: | chr28:5441694-5441844 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1-160 |
Cow position: | chr28:10615747-10615892 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-160 |
Cow position: | chr28:16856903-16857053 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr28:3423980-3423830 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-161 |
Cow position: | chr28:4077134-4077293 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 129 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 81, 47 |
Conread position: | 1-161 |
Cow position: | chr28:4159167-4159008 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 87, 41 |
Conread position: | 1-161 |
Cow position: | chr28:4282286-4282438 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1-161 |
Cow position: | chr28:14657919-14657766 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-161 |
Cow position: | chr28:21263357-21263210 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 127 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-161 |
Cow position: | chr28:21845154-21845010 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-161 |
Cow position: | chr28:25518553-25518712 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 80, 30 |
Conread position: | 1-166 |
Cow position: | chr28:3492584-3492736 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-166 |
Cow position: | chr28:3759200-3759038 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 84, 48 |
Conread position: | 1-166 |
Cow position: | chr28:8787742-8787588 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 101, 48 |
Conread position: | 1-166 |
Cow position: | chr28:17740028-17739870 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-166 |
Cow position: | chr28:21868660-21868505 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 117, 41 |
Conread position: | 1-168 |
Cow position: | chr28:11828756-11828916 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 121 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-168 |
Cow position: | chr28:34830357-34830200 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-169 |
Cow position: | chr28:13356163-13356326 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 87, 48 |
Conread position: | 1-171 |
Cow position: | chr28:3726005-3726165 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-173 |
Cow position: | chr28:659084-659253 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 121 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1-173 |
Cow position: | chr28:5236392-5236562 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 79, 41 |
Conread position: | 1-173 |
Cow position: | chr28:7350853-7350696 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 1-173 |
Cow position: | chr28:8347937-8347773 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 134 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 11, 7 |
Conread position: | 1-173 |
Cow position: | chr28:10252712-10252875 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr28:11346286-11346445 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-173 |
Cow position: | chr28:19262381-19262545 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-178 |
Cow position: | chr28:16200537-16200706 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 139 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 2-161 |
Cow position: | chr28:19994744-19994897 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 111, 47 |
Conread position: | 2-163 |
Cow position: | chr28:751430-751278 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 2-173 |
Cow position: | chr28:8716178-8716346 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 92, 47 |
Conread position: | 3-142 |
Cow position: | chr28:19127971-19128103 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-153 |
Cow position: | chr28:8165012-8165155 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 3-157 |
Cow position: | chr28:17620158-17620304 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-158 |
Cow position: | chr28:4163379-4163527 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 3-158 |
Cow position: | chr28:24767609-24767460 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 3-161 |
Cow position: | chr28:3011066-3011218 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 136, 49 |
Conread position: | 3-161 |
Cow position: | chr28:17737949-17738100 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 3-161 |
Cow position: | chr28:32014986-32014837 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 126 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 3-168 |
Cow position: | chr28:6283289-6283444 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 3-168 |
Cow position: | chr28:12951617-12951463 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 3-176 |
Cow position: | chr28:117557-117724 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 123, 47 |
Conread position: | 3-176 |
Cow position: | chr28:118815-118648 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 123, 47 |
Conread position: | 3-178 |
Cow position: | chr28:2892457-2892289 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 97, 46 |
Conread position: | 3-178 |
Cow position: | chr28:5630300-5630135 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 3-193 |
Cow position: | chr28:11307317-11307496 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 111, 32 |
Conread position: | 4-161 |
Cow position: | chr28:8259832-8259681 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 99, 45 |
Conread position: | 8-176 |
Cow position: | chr28:26269595-26269425 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 43, 158 |
Conread position: | 11-157 |
Cow position: | chr28:6563701-6563840 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 118 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 11-161 |
Cow position: | chr28:6301277-6301134 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-173 |
Cow position: | chr28:27218518-27218365 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 11-174 |
Cow position: | chr28:21118873-21118719 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 11-176 |
Cow position: | chr28:26826415-26826258 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 11-181 |
Cow position: | chr28:7644937-7644774 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 130 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 137, 31 |
Conread position: | 12-161 |
Cow position: | chr28:17680817-17680675 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 12-173 |
Cow position: | chr28:11398602-11398755 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 12-181 |
Cow position: | chr28:7697787-7697948 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 13-158 |
Cow position: | chr28:3311030-3311168 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 117 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 55-160 |
Cow position: | chr28:21363899-21363794 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 86 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 55-161 |
Cow position: | chr28:4307737-4307844 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 88 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 55-171 |
Cow position: | chr28:13048125-13048240 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 55-178 |
Cow position: | chr28:4022832-4022710 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 57-176 |
Cow position: | chr28:28765746-28765864 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 106, 0 |
Show alignments to all cow chromosomes.