Cow genome map

Conread name: Ss1.1-Tra1-TCH01H070085.5

Conread position: 1-137
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-139
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 41

Conread position: 1-143
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 96, 48

Conread position: 1-152
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 1-158
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-158
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 1-158
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-160
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 41

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-161
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 48

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 48

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 117, 9

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 51

Conread position: 1-161
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 48

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 1-161
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 44

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 48

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 105

Conread position: 1-161
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 41

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 49

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 1-166
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 37

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-166
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 33

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 152, 44

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 123, 43

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 7

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-168
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 51

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-168
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 102, 48

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 48

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-172
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 47

Conread position: 1-173
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 22

Conread position: 1-174
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-187
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 37

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 3-155
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 3-161
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 111, 28

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 3-163
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 39

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 3-166
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-166
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 3-168
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 3-168
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 44

Conread position: 3-168
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 47

Conread position: 3-168
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 3-169
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 160

Conread position: 3-169
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 25

Conread position: 3-171
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-172
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 3-173
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 3-175
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 4-159
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 30

Conread position: 4-160
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 4-166
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 4-168
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 45

Conread position: 5-168
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 6-161
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 6-161
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 40

Conread position: 6-165
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 8-161
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 10-161
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 10-173
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 11-137
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 11-159
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 11-159
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 11-161
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 11-161
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 11-161
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 11-168
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 38

Conread position: 11-176
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 12-161
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 13-161
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 14-176
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 15-178
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 32-171
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 6

Conread position: 54-173
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 110

Conread position: 55-158
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 55-163
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 55-168
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 55-169
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 55-176
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 110

Conread position: 55-187
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 57-161
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.