Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H070085.5 |
| Conread position: | 1-137 |
| Cow position: | chr3:76138633-76138505 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-139 |
| Cow position: | chr3:66563959-66563826 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 41 |
| Conread position: | 1-143 |
| Cow position: | chr3:72626568-72626704 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 1-152 |
| Cow position: | chr3:61680491-61680347 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-157 |
| Cow position: | chr3:60371158-60371010 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-158 |
| Cow position: | chr3:9662995-9663145 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-158 |
| Cow position: | chr3:72027813-72027663 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-158 |
| Cow position: | chr3:80958335-80958485 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-159 |
| Cow position: | chr3:2648334-2648484 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-160 |
| Cow position: | chr3:986189-986039 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-160 |
| Cow position: | chr3:26337842-26337995 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-160 |
| Cow position: | chr3:41510752-41510601 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 1-160 |
| Cow position: | chr3:43388951-43389103 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-160 |
| Cow position: | chr3:81616276-81616428 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:621615-621458 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 48 |
| Conread position: | 1-161 |
| Cow position: | chr3:2016606-2016459 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:4071595-4071747 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:15443552-15443705 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:15973744-15973590 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 1-161 |
| Cow position: | chr3:19044594-19044742 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:22078252-22078099 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:23804676-23804529 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:23920252-23920405 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:37641500-37641350 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:44594797-44594645 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 1-161 |
| Cow position: | chr3:53604570-53604722 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 125, 51 |
| Conread position: | 1-161 |
| Cow position: | chr3:58562875-58562717 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 48 |
| Conread position: | 1-161 |
| Cow position: | chr3:61023847-61023999 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:62186332-62186175 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 1-161 |
| Cow position: | chr3:71231572-71231419 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 1-161 |
| Cow position: | chr3:73395289-73395140 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-161 |
| Cow position: | chr3:73421309-73421469 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 105 |
| Conread position: | 1-161 |
| Cow position: | chr3:75966608-75966760 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 1-161 |
| Cow position: | chr3:76267799-76267951 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 49 |
| Conread position: | 1-164 |
| Cow position: | chr3:44218942-44218786 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-165 |
| Cow position: | chr3:59681733-59681884 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-165 |
| Cow position: | chr3:76300948-76300791 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-166 |
| Cow position: | chr3:3262649-3262815 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 37 |
| Conread position: | 1-166 |
| Cow position: | chr3:23131994-23132150 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-166 |
| Cow position: | chr3:52845729-52845575 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-166 |
| Cow position: | chr3:59605016-59604862 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-166 |
| Cow position: | chr3:68156901-68156741 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 1-166 |
| Cow position: | chr3:77098650-77098804 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-168 |
| Cow position: | chr3:635352-635195 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 152, 44 |
| Conread position: | 1-168 |
| Cow position: | chr3:2637119-2636966 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 1-168 |
| Cow position: | chr3:18479122-18479281 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 1-168 |
| Cow position: | chr3:24468210-24468368 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-168 |
| Cow position: | chr3:57577870-57577714 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-168 |
| Cow position: | chr3:59702348-59702185 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 1-168 |
| Cow position: | chr3:59947842-59947682 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-168 |
| Cow position: | chr3:62789776-62789938 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 1-168 |
| Cow position: | chr3:68303492-68303331 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 99, 48 |
| Conread position: | 1-168 |
| Cow position: | chr3:79893322-79893481 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-169 |
| Cow position: | chr3:55105972-55106132 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-169 |
| Cow position: | chr3:76056114-76056268 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-169 |
| Cow position: | chr3:76168455-76168615 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-171 |
| Cow position: | chr3:78071618-78071776 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-172 |
| Cow position: | chr3:72342422-72342259 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | chr3:3453756-3453592 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-173 |
| Cow position: | chr3:11281943-11281779 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-173 |
| Cow position: | chr3:18687075-18686919 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-173 |
| Cow position: | chr3:19611179-19611339 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-173 |
| Cow position: | chr3:21694401-21694237 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 1-173 |
| Cow position: | chr3:51150304-51150141 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 22 |
| Conread position: | 1-174 |
| Cow position: | chr3:8522980-8523142 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-176 |
| Cow position: | chr3:2675206-2675039 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-187 |
| Cow position: | chr3:65413092-65413279 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 2-165 |
| Cow position: | chr3:49363280-49363129 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 3-155 |
| Cow position: | chr3:58497832-58497687 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-161 |
| Cow position: | chr3:3656687-3656538 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 28 |
| Conread position: | 3-161 |
| Cow position: | chr3:18699936-18700087 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-161 |
| Cow position: | chr3:47198954-47199103 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-161 |
| Cow position: | chr3:79271537-79271687 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-163 |
| Cow position: | chr3:2025375-2025220 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 39 |
| Conread position: | 3-165 |
| Cow position: | chr3:55318726-55318877 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-166 |
| Cow position: | chr3:20021440-20021288 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-166 |
| Cow position: | chr3:22165243-22165397 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-168 |
| Cow position: | chr3:46259884-46259728 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-168 |
| Cow position: | chr3:49996545-49996704 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 3-168 |
| Cow position: | chr3:68587191-68587040 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 3-168 |
| Cow position: | chr3:84137642-84137798 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-169 |
| Cow position: | chr3:25702159-25702325 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 160 |
| Conread position: | 3-169 |
| Cow position: | chr3:29234506-29234664 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 3-171 |
| Cow position: | chr3:3556720-3556560 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-172 |
| Cow position: | chr3:25735731-25735892 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-173 |
| Cow position: | chr3:55730294-55730456 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-175 |
| Cow position: | chr3:79398317-79398153 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 4-159 |
| Cow position: | chr3:49482543-49482690 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 4-160 |
| Cow position: | chr3:41863793-41863650 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 4-166 |
| Cow position: | chr3:4518013-4518164 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-168 |
| Cow position: | chr3:12090848-12090690 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 45 |
| Conread position: | 5-168 |
| Cow position: | chr3:23203059-23203214 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 6-161 |
| Cow position: | chr3:6579649-6579509 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-161 |
| Cow position: | chr3:75238630-75238481 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 40 |
| Conread position: | 6-165 |
| Cow position: | chr3:68624388-68624237 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 8-161 |
| Cow position: | chr3:40145634-40145488 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 10-161 |
| Cow position: | chr3:9117199-9117050 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 10-173 |
| Cow position: | chr3:51609019-51609173 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 11-137 |
| Cow position: | chr3:42933647-42933528 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 11-159 |
| Cow position: | chr3:62312962-62312821 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 11-159 |
| Cow position: | chr3:62370221-62370080 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 11-161 |
| Cow position: | chr3:36375374-36375516 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 11-161 |
| Cow position: | chr3:41366536-41366686 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-161 |
| Cow position: | chr3:67942369-67942512 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 11-168 |
| Cow position: | chr3:82366293-82366141 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 11-176 |
| Cow position: | chr3:30180247-30180096 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 12-161 |
| Cow position: | chr3:53270996-53270854 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 13-161 |
| Cow position: | chr3:48900157-48900309 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 14-176 |
| Cow position: | chr3:210483-210329 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 15-178 |
| Cow position: | chr3:84807166-84807320 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 32-171 |
| Cow position: | chr3:83199664-83199526 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 54-173 |
| Cow position: | chr3:18326698-18326817 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 92, 110 |
| Conread position: | 55-158 |
| Cow position: | chr3:58010701-58010804 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-163 |
| Cow position: | chr3:42484058-42483948 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 55-168 |
| Cow position: | chr3:38783735-38783623 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 55-169 |
| Cow position: | chr3:37851626-37851513 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 55-176 |
| Cow position: | chr3:63069234-63069356 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 55-187 |
| Cow position: | chr3:11640863-11640732 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 57-161 |
| Cow position: | chr3:42589227-42589122 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.